Gene BBta_0979 details

Gene Information

• Locus tag: BBta_0979
• Symbol: nadE
• ID: 5155252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 1014856
• End bp: 1016892
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640555973
• Product: NAD synthetase
• Protein accession: YP_001237141
• Protein GI: 148252556
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0171] NAD synthase
• TIGRFAM ID: [TIGR00552] NAD+ synthetase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.989674
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 0.179553
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATTTCC ATTCGATCTA CCGGCATGGC TTCGCCCGCG TCGCCGCTTG CGTCACCGCC 
AGCAGCGTCG CCAACCCCGC CGCCAATGCC GCCGCGATTC TGGCTGCGGC GCGCGCCTGC 
CATGACCAGG GCGCCGCGGT CGCGGTCTTC CCCGAGCTCT GCCTGTCCGG CTATGCCATC 
GACGATCTGG TCAAGCAGGA CCCGCTGCTC GATGCCGTCC AGCGCGGCCT GCTCACTCTG 
GTCGAAGCCT CGCACGATTT GACCCCGGTC TTGATCGTCG GCGCGCCGCT GCGCTTTTCT 
CATCGCGTCT ACAATTGCGC GGTGGTGATT CATCGCGGCG AGGTGCTCGG CGTTGTCCCG 
AAGATCTATC TTCCGACCTA TCGCGAATTC TACGAAGGCC GGCACTTCGC CTCCGGCGCC 
GGCATCCGCG GCGAGATGAT CGAGGTCGCC GAGACCATGG CGCCGTTCGG CACCGACCTG 
TTGTTCGCCG CTGCCGATGT CGCCGGCCTC GTGATCGGCG TCGAGGTCTG CGAGGACATG 
TGGATCCCGG TGACGCCGGC CTCCGAGCTC GCGCTCGCCG GTGCCACCGT GCTCGCCAAT 
CTCTCCGGCA GTCCGATCAC CGTCGGTCGC GCCGAGTCGC GCTCGCTGTT GTGCCGCTCG 
ACCTCGGCGC GCTGTCTCGC CGCCTACATC TACGCGGCCG CCGGCGTCGG CGAATCCACC 
ACCGATCTCG CCTGGGACGG CCAGACATCC ATCTTCGAAA ACGGGGTGCT GCTGGCCGAG 
AGCGAGCGCT TCCGCCAGAC CGGCCAGACC ATCTTCGCCG ATGTCGATCT CGATCTGCTG 
CGCCAGGAGC GCGCGCTGAT GGGCACGTTC GACGACAATG CGCGCGCGCA GACGCGCGGC 
GAGCATTATC GCCGCATCGG CTTCGAGCTG CAGCCGACAA AGGACGACAT CGGCTTCATG 
CGCAGCATCG AGCGCTTCCC GTTCGTGCCG AGCGATGCCG CGCGGCTCGA TCAGGACTGC 
TACGAGGCCT ACAACATCCA GGTCGCCGGC CTGACGCAGC GGCTGCGCGC CACCGGCACC 
AAGCGCATCG TGATCGGCGT CTCCGGCGGC CTCGATTCGA CGCATGCGCT GATCGTTGCC 
GCCAAGGCGA TGGATCTGCT CGGCCTGCCC AGAACCAACA TCCTCGCTTA TACGATGCCG 
GGCTTTGCCA CCGGCGCTCA GAGCAAGAGC TACGCGCATG CGCTGATGAA GGCGCTCGAG 
GTCAGCGCCG CCGAACTCGA TATCCGCCCC GCCGCGACGC AGATGCTGAA GGACATCGGT 
CATCCGTTCG GGCGCGGCGA GGCCGTTTAC GACGTCACCT TCGAGAATGT GCAGGCGGGC 
CTGCGCACCG ATTATCTGTT CCGGCTCGCC AATGATCGCG GCGGCCTCGT GCTCGGCACC 
GGCGATCTGT CCGAGCTCGC GCTGGGCTGG TGCACCTATG GCGTCGGCGA TCAGATGTCG 
CACTACAACG TCAATGCCGG GGTGCCGAAG ACCCTGATCC AGCATCTGAT CCGCTGGGTG 
ATCGCCTCGC ATCAGTTCTC GGCCGATGTC GACCGCACGC TCGAGGCGGT GCTGGCAGCG 
GAGATCTCGC CGGAGCTGGT GCCGGTGAAG GAGGGCGAGA CGCCGCAGAG CACGCAGGCC 
GCGATCGGCC CCTATGAGCT GCAGGATTTC AACCTGTTCT ACACGCTGCG CTACGGCATG 
CGGCCGTCGA AGATCGCGTT CATGGCGCAT CACGCCTGGA AGGATGTCGG CGACGGCGCC 
TGGCCGCCCG GCTTTCCGGC CGACAAGCGT CATGCCTACG CGCTCGGCGA GATCCGCAAA 
TGGCTGGAAG TGTTCCTCAA GCGCTTTTTC GCCTTCAGCC AGTTCAAGCG GTCGGCGATG 
CCGAATGGCC CGAAGGTCGT GGCCGGTGGC TCGCTGTCGC CGCGCGGCGA CTGGCGCGCG 
CCGTCCGACG GCAACGCCAC GGCGTGGCTG GAGGATCTGG AGAGCGTGCC GAAGTGA 

 

Protein sequence

MNFHSIYRHG FARVAACVTA SSVANPAANA AAILAAARAC HDQGAAVAVF PELCLSGYAI 
DDLVKQDPLL DAVQRGLLTL VEASHDLTPV LIVGAPLRFS HRVYNCAVVI HRGEVLGVVP 
KIYLPTYREF YEGRHFASGA GIRGEMIEVA ETMAPFGTDL LFAAADVAGL VIGVEVCEDM 
WIPVTPASEL ALAGATVLAN LSGSPITVGR AESRSLLCRS TSARCLAAYI YAAAGVGEST 
TDLAWDGQTS IFENGVLLAE SERFRQTGQT IFADVDLDLL RQERALMGTF DDNARAQTRG 
EHYRRIGFEL QPTKDDIGFM RSIERFPFVP SDAARLDQDC YEAYNIQVAG LTQRLRATGT 
KRIVIGVSGG LDSTHALIVA AKAMDLLGLP RTNILAYTMP GFATGAQSKS YAHALMKALE 
VSAAELDIRP AATQMLKDIG HPFGRGEAVY DVTFENVQAG LRTDYLFRLA NDRGGLVLGT 
GDLSELALGW CTYGVGDQMS HYNVNAGVPK TLIQHLIRWV IASHQFSADV DRTLEAVLAA 
EISPELVPVK EGETPQSTQA AIGPYELQDF NLFYTLRYGM RPSKIAFMAH HAWKDVGDGA 
WPPGFPADKR HAYALGEIRK WLEVFLKRFF AFSQFKRSAM PNGPKVVAGG SLSPRGDWRA 
PSDGNATAWL EDLESVPK