Gene BBta_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0929 
Symbol 
ID5148793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp963543 
End bp964508 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID640555923 
Productputative 3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_001237091 
Protein GI148252506 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.687919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA CGCATTCGCT CGGCTGGATC GGCATGGGGC GCATGGGCTA TCCGATGGCC 
GAACGTCTCT TGAAGGCTGA CCTGAAGCTC TCGATCTGGA ACCGGACCCG CGCCAAGGCC
GAGCCGCTGG CGGCGAAGGG CGGCGTGATC GTCGACCGTC CGAGCGATCT TGCGACGTGC
GACATCGTGT TCTCGATGGT GTCGACCGGC AAGGATCTCG AACAGGTCTA TTTCGGCGAC
AACGGCCTCG TGGCGTCGAG CCTCGGACCG CGGCCCAGGA TCCTGGTCGA CTGCTCCTCG
ATCGGCATCG AGCAGTCGGA GGCGATCGCC GCCAGACTGA AGCGGCTCGA CTGCGCGTTC
GTTCGTGCGC CGGTGTCCGG CAACGGCAAA TGCGTCAAGG CGGGGAAGCT GTCGTCGGTG
GTCTCCGGGC CGGAATCGGC GTTCGAGATC ATCGCGCCCT ATCTCGCCAA GATCGCCGTC
TCCGGCGTGT CCTATGTCGG CGAGGGCGAG CTCGCGCGCA TCTGCAAGAT CGCGCACAAT
GTGTTCCTCG GCGTCGTGAT CCAGAATCTC GCCGAGATCA CGATCCTGGC GCAGAAGGCC
GGCGTGCCGC GCCATGCCTT TCTGGATTTC ATGAATGCCA GCGTGATGGG ATCGACCTTC
ACGAAATACA AGAGCAACGC GCTGGTCAAT CTCGACTGGA CCACGACCTT CACGCCGACG
CTGCTGCGCA AGGATCTCGA TCTCGGCCTG TCGGCGGCGC GCCAGCTCGA TGTCGCGATG
CCGGTCGCGG CCGCGACACG CGAAGCGCTG CAGGCCCATG TCGGCGCCGC CTCGCTGCAG
GCTGATCCCG CCGGCTATCT GGACAAGGAT TTTGCGGCGC TGCTTGAGAC CGTGGCGCTC
GCTGCCGGCG TGAAGCTGCA GCCCGAAAAC GTGCCGATGC CGACGGGGCT GGAGACCGAG
GGGTAG
 
Protein sequence
MAATHSLGWI GMGRMGYPMA ERLLKADLKL SIWNRTRAKA EPLAAKGGVI VDRPSDLATC 
DIVFSMVSTG KDLEQVYFGD NGLVASSLGP RPRILVDCSS IGIEQSEAIA ARLKRLDCAF
VRAPVSGNGK CVKAGKLSSV VSGPESAFEI IAPYLAKIAV SGVSYVGEGE LARICKIAHN
VFLGVVIQNL AEITILAQKA GVPRHAFLDF MNASVMGSTF TKYKSNALVN LDWTTTFTPT
LLRKDLDLGL SAARQLDVAM PVAAATREAL QAHVGAASLQ ADPAGYLDKD FAALLETVAL
AAGVKLQPEN VPMPTGLETE G