Gene BBta_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0927 
Symbol 
ID5149434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp961038 
End bp962012 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID640555921 
ProductLacI family transcription regulator 
Protein accessionYP_001237089 
Protein GI148252504 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.845689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCCCT CGACCGTGTC GCGGGCGCTG AGCCCGGCCA TGAAGCATCT GGTCGCTGCC 
GACGTCGCCG AGCGGATCCA GGCCGAGGCC AACGCGCTCG GCTACCGGTT GAACATGGCC
GCCAAGGGCC TGCGCACCGG CCGCAGCGGC CTGATCGGCG TGCTGGCGCC GGACATTGCG
GATCCCGGCT TCCCCCCCGT TCTCTCGGGC CTGGCGGAAC ATCTCAACGC GGAGGGATAT
GCAACGATCG TCGTCGATGT CGGCACGGGT GGCTCGCAGC AGGATCTCGT CGACAGCCTG
ATCGCGCGCG GTGTCGACGG CCTGGTCCTG GCGACGGTGA GGCTGCACGA CGACGTCGTG
GCGCACTCCG TCGGAGCATC GACGCCAGTG GTGCTGGTCA ATCGCGTCGA TGCGGCCGGG
GAGTTGCCGT CGGCGGCCAG CGACGATGCG GCCGGCATGC GGCTGGCGGT CGATCATCTG
GTCGCGCTGG GCCATCGGCG GATCGGCCAT GTCGCGGGCC CGCAGGAGAT CTCGACCGGC
GCGCGGCGAC GCGCAGGCTT CGAAGCCAGC ATCGCAGATT CCGGCTTGTC CCTCGGCGAT
GCCCCGATCG AGGCCGCCAC CGCCTATACG CGCGCCGCCG GCCGCGAGGC GGGACTACGG
CTTCTCGGCC GCAAGGCGAG GCCGACCGCC ATCGTCGCCG CCAACGATCT GCTGGCGCTC
GGCGTCTATG ATGCGCTCGC CGCGAGCGGC CTCACCTGCC CGGCGGATGT CTCCGTCGTC
GGCCACAACG ACATGCCCTT CGTCGACCTG GTCTCGCCGC CGCTCACCAC CGTACGGATC
GCGCAGCGCG AGATGGGCGC GACCGCAGCG CGGCTGCTGC TCGCGCGCAT CCGCAGTCCC
GACGCCGCCA ACGAGCATGT CGTGCTGCAG CCGGAGCTCA TCATCCGCGC ATCGACGGCG
CGGCCGCGCT CCTGA
 
Protein sequence
MHPSTVSRAL SPAMKHLVAA DVAERIQAEA NALGYRLNMA AKGLRTGRSG LIGVLAPDIA 
DPGFPPVLSG LAEHLNAEGY ATIVVDVGTG GSQQDLVDSL IARGVDGLVL ATVRLHDDVV
AHSVGASTPV VLVNRVDAAG ELPSAASDDA AGMRLAVDHL VALGHRRIGH VAGPQEISTG
ARRRAGFEAS IADSGLSLGD APIEAATAYT RAAGREAGLR LLGRKARPTA IVAANDLLAL
GVYDALAASG LTCPADVSVV GHNDMPFVDL VSPPLTTVRI AQREMGATAA RLLLARIRSP
DAANEHVVLQ PELIIRASTA RPRS