| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0876 |
|---|
| Symbol | |
|---|
| ID | 5154812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 908503 |
|---|
| End bp | 909390 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640555873 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001237043 |
|---|
| Protein GI | 148252458 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGC TACAACCGAA GCCCAAGGGC CGACGTCAGG CAGCATCACT GCGGCCCAAA
ACAACAACAG CGGATCGTGT CAGGTCGATG CCGAAACTTA AGCGGACTGA TGAGGAGAAG
AAGCAGGCGC GCGGCGACGG GCCTGAGTTC GTGGAGGCGC TCGATCGCGG TTTGCGGGTC
ATACAGGCCT TCAGCCGCGA GGGGCGTCCA ATGACACTCA GCAAGGCGGC GGAGCTCACT
GGGCTTGCGC GCGCGACCGT GCGGCGCATC CTGCTGACGC TCAAGGCCTC GGGGCTGGTG
CATGGCGACG ACCGGCTGTT CTCGCTGACA CCACGCGTCC TGCTGCTGGC ATCGAGCTAT
CTCGCATCGA ACCAGATCAA CACGGTGATG CAGCCGTTGA TGGATGCGAC GGCCGCAGAG
GCGCGCGAGG TCTGCTCGCT CGCCGTTCTC GACGGCGACG AGGTCGTGTT CATCGCGCGC
GCGACCGCGA CGCGGATGTT CTCCACGGGG CTCGAGATCG GCTACCGGCT GCCCGCTCAT
TGCACCTCGG TCGGCCGAGC GCTACTGAGC CGTTTGCCGG ACGATCAGTT GCGCCAGACG
ATCGAGCGCA CGGAGCTCAA AGCGATGACG CCGCAGACGA CCACCGACAA GGAGGCACTG
ATCGCAGCGA TCGACGCCGT CCGCAGCGAG GGCTATTCCG TGGTCGATGG CGAGGCCGAG
CACGGCTTCC GCTCGATTTC CGTGCCGATC CGCCGCTATG ACGGCGGCAT CGTCGCCGCC
GCCAATATCG GCGGGCATGT CGACCGCATC ACGGTCGACG AAATGAAGGA GCGCTTCCTG
CCGCTCCTGC AGCAGCTGGC CACGACCGCG CAGCCGCTGC TGGTGTAA
|
|---|
| Protein sequence | MKKLQPKPKG RRQAASLRPK TTTADRVRSM PKLKRTDEEK KQARGDGPEF VEALDRGLRV
IQAFSREGRP MTLSKAAELT GLARATVRRI LLTLKASGLV HGDDRLFSLT PRVLLLASSY
LASNQINTVM QPLMDATAAE AREVCSLAVL DGDEVVFIAR ATATRMFSTG LEIGYRLPAH
CTSVGRALLS RLPDDQLRQT IERTELKAMT PQTTTDKEAL IAAIDAVRSE GYSVVDGEAE
HGFRSISVPI RRYDGGIVAA ANIGGHVDRI TVDEMKERFL PLLQQLATTA QPLLV
|
|---|
| |