Gene BBta_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0861 
SymbolhemA 
ID5155295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp888579 
End bp889808 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content66% 
IMG OID640555858 
Product5-aminolevulinate synthase 
Protein accessionYP_001237028 
Protein GI148252443 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.787076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0986028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACA GCCAGTACTT CAGTGCCGCC CTCGGTCGTC TGCATGATGA ACGTCGCTAC 
AGGGTTTTCG CCGATCTCGA ACGCATCGCC GGCCGGTTCC CGCACGCGAC CTGGCATTCC
CCGAGCGGTC CGCGCAATGT CGTGATCTGG TGCTCCAACG ACTATCTCGG CATGGGTCAG
CATCCGAAGG TGGTCGGCGC GATGGTCGAG ACCGCAACCC GCGTCGGCAC TGGCGCCGGC
GGCACCCGCA ACATCGCCGG AACGCATCAT CCGCTGGTGC AACTGGAAGC CGAGCTCGCC
GATCTCCACG GCAAGGAAGC GGCGCTGCTG TTCACCTCGG GCTATGTCTC CAACCAGACC
GGCATCGCTA CGCTCGCCAA GCTGATCCCG GACTGCCTGA TCCTGTCGGA CGCGCTCAAC
CACAATTCGA TGATCGAGGG CGTGCGCCAG TCCGGCTGCG AGCGCCAGAT CTGGCGCCAC
AACGATCTCG CCCATCTCGA GCAGCTGCTG ATCGCCGCCG GCCCCGACCG GCCGAAGCTC
ATCGCCTGCG AGAGCCTGTA TTCGATGGAC GGCGACGTCG CGCCGCTCTC GGCGATCTGC
GATCTCGCCG AGCGCTACAA GGCGATGACC TATGTCGACG AGGTGCATGC GGTCGGCATG
TACGGCCCGC GCGGCGGCGG TATCGCCGAG CGCGACGGCG TCATGCACCG CATCGACATC
CTCGAAGGCA CGCTTGCGAA GGCGTTCGGC TGCCTCGGCG GCTATATCGC CGCCAAGGGC
GAGATCATCG ACGCCGTGCG CTCCTACGCG CCGGGCTTCA TCTTCACGAC CGCGCTGCCG
CCGCCGATCT GCTCGGCGGC CACTGCTGCG ATCAGGCACC TGAAGTCGTC GAGCTGGGAA
CGCGAGCGCC ACCAGGACCG CGCCGCACGC GTCAAGTCGA TCCTCAATGC CGCCGGCCTG
CCGGTCATGG CCAATGACAC CCATATCGTG CCGCTGTTCG TCGGCGATCC CGAGAAGTGC
AAGCAGGCCT CCGACCTGCT GCTCGAAGAG CACGGCATCT ACATCCAGCC GATCAACTAT
CCGACGGTCG CCAAGGGCAC CGAGCGCCTG CGCATCACGC CCTCCCCCTA TCACGATGAC
GGCCTGATCG ACCGCCTCGC CGAGGCCCTG CTGCAGGTCT GGGAACGCCT CGGCCTCGCA
CTGCACAAGA AGCCGCTGGC GGCGGAGTAG
 
Protein sequence
MDYSQYFSAA LGRLHDERRY RVFADLERIA GRFPHATWHS PSGPRNVVIW CSNDYLGMGQ 
HPKVVGAMVE TATRVGTGAG GTRNIAGTHH PLVQLEAELA DLHGKEAALL FTSGYVSNQT
GIATLAKLIP DCLILSDALN HNSMIEGVRQ SGCERQIWRH NDLAHLEQLL IAAGPDRPKL
IACESLYSMD GDVAPLSAIC DLAERYKAMT YVDEVHAVGM YGPRGGGIAE RDGVMHRIDI
LEGTLAKAFG CLGGYIAAKG EIIDAVRSYA PGFIFTTALP PPICSAATAA IRHLKSSSWE
RERHQDRAAR VKSILNAAGL PVMANDTHIV PLFVGDPEKC KQASDLLLEE HGIYIQPINY
PTVAKGTERL RITPSPYHDD GLIDRLAEAL LQVWERLGLA LHKKPLAAE