Gene BBta_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0838 
Symbol 
ID5154825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp863406 
End bp864185 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID640555836 
Productputative phenazine biosynthesis PhzC/PhzF protein 
Protein accessionYP_001237006 
Protein GI148252421 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCATCT GCGAGACGTT GCCCGAGGCC GCCACCATGC AGGCGATGGC GGCTGACATC 
GGCTATTCGG AGACGGCGTT CGCGGCGCCC ATCGGCGACA CATGGCGGGT GCGCTATTTC
GCGCCGCAGG CCGAGGTTGA TTTCTGCGGC CACGCGACCA TCGCGCTCGG CGCCGCGCTC
GCCAGGCATC AAGCCTCCGG CACGTTTGCG CTCACGCTCA ATCATGCCGA CATCACCGTC
GATGGCCATC TCACGGCAAC GGACTGGAGC GCATCGTTCC AGTCGCCGCC GACGCAGACG
CGCGCCCTGC CGTCGGCGGC GCTCGACGAG ACCCTCGCGC TGTTCGGGCT ATCACAGGGC
GACCTCGATC CGCGCATCCC GCCTGTCATC GCCCATGCCG GAATGGATCA TCCCATCCTC
GCGCTGCGCG ACCGCAGCCG CCTCGGCGCC ATCAGCTACG ACTTTGCCCG AGGCGAGGCG
CTGGCGCAGC GCGAACGCTT CTGCACTTTC GCCCTGGTGC ACGCCGAGAC GCCGCAACTC
TTCCATGCCC GCAACCCGTT CCCGTTCGGC GGGGTCTACG AGGACCCGGC GACCGGCGCT
GCGGCCGCAG CGCTCGCCGG CTATCTGCGC GAGCTGTCCT GGACGGCCGC AGCACCGATC
GTGATCCGGC AAGGCGAGGA CATGGGCGTG CCGTGCAGCC TGCAGGTCGA TCTCGATGGA
GCGCGTGGGG CGCCGGTCAG GGTGTCCGGC AGCGTGCGAT CGATCCAGCC CGCGGCATAG
 
Protein sequence
MVICETLPEA ATMQAMAADI GYSETAFAAP IGDTWRVRYF APQAEVDFCG HATIALGAAL 
ARHQASGTFA LTLNHADITV DGHLTATDWS ASFQSPPTQT RALPSAALDE TLALFGLSQG
DLDPRIPPVI AHAGMDHPIL ALRDRSRLGA ISYDFARGEA LAQRERFCTF ALVHAETPQL
FHARNPFPFG GVYEDPATGA AAAALAGYLR ELSWTAAAPI VIRQGEDMGV PCSLQVDLDG
ARGAPVRVSG SVRSIQPAA