| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0790 |
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| Symbol | lysK |
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| ID | 5153781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 809667 |
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| End bp | 811313 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640555788 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001236958 |
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| Protein GI | 148252373 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1384] Lysyl-tRNA synthetase (class I) |
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| TIGRFAM ID | [TIGR00467] lysyl-tRNA synthetase, archaeal and spirochete |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.677714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00421967 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACGA TCGACCTTGT CCCAACCAGC CCGAGCGATC TGCGCGCGCT CGCCGAAAAC
TCCAACGCCT GGCCGTTCGA ACAGGCGAAA GCGATCGTCA ACCGGCTGAA GAAGACCCCT
AAGGATGAGG TGCTGTTCGA GACCGGCTAC GGCCCGTCCG GCCTGCCGCA TATCGGCACC
TTCGGCGAGG TCGCACGCAC CACGATGGTG CGCCATGCCT TTCGCGTGCT GACCGAGGAC
AAGATCAAGA CCCGGCTCCT GGCGTTCTCC GACGACATGG ACGGCCTGCG CAAGGTGCCG
GACAATGTGC CGAACAAGGA GATGCTGGCG AGCCATCTCG GCAAGCCGCT GTCGCGCATC
CCCGATCCGT TTTCGAACGA GTATCCGTCG TTCGCTGCGC ACAACAATGC GCGGCTGCGC
GCCTTCCTGG ACAGGTTCGG GTTCGATTAC GAATTCGCGT CCTCGACCGA GTACTACACC
TCCGGCAAGT TCGATGCGGC GCTGTTGCGC ATGCTGGAGC GACTGGAAAA GGTGATGGCG
ATCATGCTGC CGTCGCTCCG CGAGGAGCGC GCGGCGAGCT ATTCGCCGTT TCTCCCGATC
TGCCCGCGCA CCGGCCTCGT GCTGTACGTG CCGATCGTCG CGCACGACGC CAAGGCCGGC
ACCATCTCCT ATGACGATCC CGAGACCAAG GAGCGGATGA CCGTTCCGGT GACCGGCGGG
CATTGCAAGC TGCAATGGAA GCCGGACTGG GCGATGCGCT GGCACGCGCT CGGCGTCGAC
TATGAAATGG CCGGCAAGGA CCTGATCGAC TCGGTGAAGC TGTCGGGCAA GATCTGCGCG
GCGCTCGGCG GCACGCCGCC GGAGGGCTTC AACTACGAGC TGTTTCTGGA CGAGAAGGGC
CAGAAGATCT CGAAGTCGAA GGGCAATGGC CTGACCATCG ACGAATGGCT GCGCTACGCG
TCGCCGGAAT CGCTGTCGCT GTTCATGTAT CGCGAGCCGA AGGCGGCGAA GCGGCTGTAT
TTCGACGTCA TCCCGCGCAA TGTCGACGAC TACCAGCAGT TCCTGGAAGG CTTTGCGAAG
CAGGACCCCA AGCAGCAGCT CGGCAATCCG GTCTGGCACA TCCATTCCGG GACGCCGCCG
AAGGCCGACA TGCCGGTGAC GTTCCAACTG CTGCTGACGC TGGTGTCGTC GTCGAATGCC
GAGAATGCCG AGACCCTGTG GGGCTTCATC GGCCGCTACC GGCCGGGCGT GACGCCGCAG
ACGCATCCCA AGCTCGACGC GATGGTCGGC TACGCCATCA ATTATTACCG CGACTTCGTT
GCGCCGACGA AGACGTTCCG CGAGCCGACC GAAGGCGAGC GCGTGGCGCT GCAGGACCTG
CGCGATGCGC TGTCGAACCT GCCGGCGGAG GCGCCGGCCG AGGACATCCA GAACGTGGTC
TATGAGATCG GCCGCCGCGA GCCGTTCCTC GACCACGCCA AGAAGGGCAA GGACGGCCGG
CCCGGCGTGT CGCTGGACTG GTTCAACATG CTCTATCAGG TGCTGCTCGG CCAGGAGAAG
GGCCCGCGCT TCGGCTCCTT CGTCGCGGTC TACGGCCTCA ACAACGCGGT GGCGATGATC
GACGGCGCGC TGGCGCGCTC CGCGTGA
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| Protein sequence | MSTIDLVPTS PSDLRALAEN SNAWPFEQAK AIVNRLKKTP KDEVLFETGY GPSGLPHIGT
FGEVARTTMV RHAFRVLTED KIKTRLLAFS DDMDGLRKVP DNVPNKEMLA SHLGKPLSRI
PDPFSNEYPS FAAHNNARLR AFLDRFGFDY EFASSTEYYT SGKFDAALLR MLERLEKVMA
IMLPSLREER AASYSPFLPI CPRTGLVLYV PIVAHDAKAG TISYDDPETK ERMTVPVTGG
HCKLQWKPDW AMRWHALGVD YEMAGKDLID SVKLSGKICA ALGGTPPEGF NYELFLDEKG
QKISKSKGNG LTIDEWLRYA SPESLSLFMY REPKAAKRLY FDVIPRNVDD YQQFLEGFAK
QDPKQQLGNP VWHIHSGTPP KADMPVTFQL LLTLVSSSNA ENAETLWGFI GRYRPGVTPQ
THPKLDAMVG YAINYYRDFV APTKTFREPT EGERVALQDL RDALSNLPAE APAEDIQNVV
YEIGRREPFL DHAKKGKDGR PGVSLDWFNM LYQVLLGQEK GPRFGSFVAV YGLNNAVAMI
DGALARSA
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