| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0742 |
|---|
| Symbol | |
|---|
| ID | 5153329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 762284 |
|---|
| End bp | 763057 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640555742 |
|---|
| Product | putative ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_001236913 |
|---|
| Protein GI | 148252328 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.267111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC TGTCCTTCCG CAACGTCTGG GTCGAGTACG GCAACCAGGT CGTGCTCGAG
CGCGTCAATC TCGAGATCAC CTCCGGCACC TTCCTGTCGA TCGTCGGTCC CTCCGGCGCG
GGAAAGAGCA CGTTCCTGCG GCTGATCCTC GGCCAGGAGC GGCCGAGCCA GGGCGCCGTG
CTGCTCGACG GCGAGCCGTT TCCGGCCGAG CCGGGGCCCG ATCGCGGCAT CGTGTTCCAG
CGCTATTCGG TGTTCCCGCA TCTGACCGTG CTCGGCAATG TGCTGCTCGG CTATGAGCTC
GCGGCGCGCC CGTTCACGGC GCGGCTGTTC GGCACAGCGC GCAGGCAGGC GGTGGAGAAG
AGCCGCGCGC TGATCGACGC CGTTGGTCTC GGCGCTCACT GCGACAAATA TCCGAGCGCG
CTGTCCGGCG GCATGCAGCA GCGGCTGGCG ATCGCGCAGG CGCTGGCGAA GCAGCCGCGC
GTGCTGTTGC TCGACGAGCC CTTTGGCGCG CTCGATCCCG GCACCCGCGC GCAGATGCAT
GCGCTGATCA AGCCGCTGTG GCGCGAGCAC AAGATGACCA TCGTGATGGT CACCCACGAC
ATCAAGGAGG CGTTCGGCCT GGCGACGCGG CTGATCGCGC TCGACCGTCC CCGCAAGGAT
CCGCAGGCGC CCGAACGGTT CGGCGCCCGC ATCACCTACG ATCTCGATCT CACCCGCGAG
AGTCCTGTGC CCGTGCTCGG CTTCATCCGT GCCAGCGCGC AGGCGGCGCA ATAG
|
|---|
| Protein sequence | MSTLSFRNVW VEYGNQVVLE RVNLEITSGT FLSIVGPSGA GKSTFLRLIL GQERPSQGAV
LLDGEPFPAE PGPDRGIVFQ RYSVFPHLTV LGNVLLGYEL AARPFTARLF GTARRQAVEK
SRALIDAVGL GAHCDKYPSA LSGGMQQRLA IAQALAKQPR VLLLDEPFGA LDPGTRAQMH
ALIKPLWREH KMTIVMVTHD IKEAFGLATR LIALDRPRKD PQAPERFGAR ITYDLDLTRE
SPVPVLGFIR ASAQAAQ
|
|---|
| |