Gene BBta_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0686 
Symbol 
ID5152268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp702488 
End bp703177 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID640555688 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001236860 
Protein GI148252275 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTATGTT GTGACGCAAC AACCGCGATC AGGCTCGTGC TCAACATCCG TCATCTTACC 
AAGTCCTATC GATCCGGCGG CGAGCCGGTC AAAGTCCTGC GCGGCGTCGA CCTCACGGTC
GCCGCGGGCG AGCGCGTGGC GCTGACGGGG GAATCCGGCT CCGGCAAGAG CACGCTGCTG
CATCTGATCG CCGGGCTCGA CGCCGCCGAT GGCGGCGACA TCCTGCTCGA AGGCGCCTCG
ATCGGCACGC TGGACGACGC GGCGCGCGCA GCGATCCGAC GCGAACGGCT CGGCCTCGTG
TTCCAGCAGT TCAATCTGGT GCCGAGCCTG TCGGTGGCAG ACAATCTCAA CTTTCAGGCC
CGGCTCGCCG GACGCCACGA TCCCGCCTGG CACACCGAGC TGGTCGAGCG GCTCGGGCTC
AAGCCATTGC TCAAGCGTTA TCCGGAGCAA TTGTCGGGCG GCCAGCAGCA GCGCGTCGCG
ATCGGCCGCG CGCTGGCGGT CAGGCCCAGC CTGCTGCTCG CGGATGAGCC GACCGGCAAT
CTCGACGAGG ACACCGCCGA CGAGGTGATG GCGCTGACGC GCGACCTCGT CGCGCGCACC
GGCTGCGGCT TCCTGATGGT GACGCATAGC GCACGGCTGG CGGCGATGCT CGACCGCCAG
GTTCACCTGC ATGCCGGACG CGTCGCATGA
 
Protein sequence
MLCCDATTAI RLVLNIRHLT KSYRSGGEPV KVLRGVDLTV AAGERVALTG ESGSGKSTLL 
HLIAGLDAAD GGDILLEGAS IGTLDDAARA AIRRERLGLV FQQFNLVPSL SVADNLNFQA
RLAGRHDPAW HTELVERLGL KPLLKRYPEQ LSGGQQQRVA IGRALAVRPS LLLADEPTGN
LDEDTADEVM ALTRDLVART GCGFLMVTHS ARLAAMLDRQ VHLHAGRVA