Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0656 |
Symbol | |
ID | 5150724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 665324 |
End bp | 666463 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640555658 |
Product | branched chain amino acid ABC transporter permease |
Protein accession | YP_001236830 |
Protein GI | 148252245 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.370011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCA ACTCGCGCTT TTTCAACCGA TCAGAACTCA TCGGCTTCGT CTCGCTGCTG CTCCTGCTCG TCGTCATCCT GCCCCTGGCG CTGGATGTGT TCCGCCTGAA CCTGGTCGCG AAATATCTGA CCTATGCCTT CGTCGCGATC GGCCTGGTGC TGTGCTGGGG CTATGGCGGC ATTCTCAGCC TGGGGCAGGG CGTGTTCTTC GGCCTTGGCG GCTACTGCAT GGCGATGTTC CTGAAGCTGG AGGCCTCAAG CGTCGCCAAC ACCAAGATCC AGTCGACGCC TGGCATCCCC GACTTCATGG ACTGGAATCA GCTGACCCAG CTGCCGTTCT TCTGGAAGCC GTTCCAGAGT TTTCCATTCG CGCTTGCGGC AATCATCCTG GTGCCGGCGA TCTTCTCCTT CATCATCGGC GCGGCGATGT TCAAGCGGCG GGTCGGCGGC GTCTACTTCG CGATCATCAC CCAGGCCATC GCGGCCATCA TGACGATCCT GATCGTGGGA CAGCAGGGTT ACACCGGCGG CATCAACGGC ATTACCGACC TCCGCACCTT GCACGGCTGG GACATCCGTA CCGATCATGC CAAGTACATC CTCTATTTCG TCGAGGTGTT CTTCCTGTTC GTCGCCATCC TGGTGGCGCA GTTCATCCGC CTGACCAAGC TCGGCCGTAT CCTGGTGGCG ATGCGTGAAC AGGAGGATCG CGTGCGCTTC TCCGGCTATA GCGTCGCCAA CTTCAAGATC TTCGCCTTCT GTGCGGCGGC GGTCTTTGCC GCGGTCGGCG GCGCGCTGTT CACCCTCGAG GTCGGCTTCA TGTCGCCGTC CTTCGTGGGC ATCGTGCCCT CGATCGAGAT GGTGATCTAC ACCGCGGTCG GCGGCCGGCT GTCGATCTTT GGCGCGGTCT ACGGCTCGCT GCTGGTCAAC TTCGCCAAGA CCAGCCTGTC GGAGACCTTC CCGCAGCTCT GGTTGTTTGG CCTCGGCGCG CTCTTCATCG CGGTCGTCCT CGCTTTCCCG AACGGTCTCG CCGGCATCTG GGGCGATTAT GTGCAGCCGC GCATCGACCG GCTGCTGGCG TCGCGCAGCA AGAAATCCGG CAATGGCGGC CTTGTCGCCA ACGGCGCCCC CGCAGAGTGA
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Protein sequence | MIINSRFFNR SELIGFVSLL LLLVVILPLA LDVFRLNLVA KYLTYAFVAI GLVLCWGYGG ILSLGQGVFF GLGGYCMAMF LKLEASSVAN TKIQSTPGIP DFMDWNQLTQ LPFFWKPFQS FPFALAAIIL VPAIFSFIIG AAMFKRRVGG VYFAIITQAI AAIMTILIVG QQGYTGGING ITDLRTLHGW DIRTDHAKYI LYFVEVFFLF VAILVAQFIR LTKLGRILVA MREQEDRVRF SGYSVANFKI FAFCAAAVFA AVGGALFTLE VGFMSPSFVG IVPSIEMVIY TAVGGRLSIF GAVYGSLLVN FAKTSLSETF PQLWLFGLGA LFIAVVLAFP NGLAGIWGDY VQPRIDRLLA SRSKKSGNGG LVANGAPAE
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