Gene BBta_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0648 
SymbolmtnA 
ID5151366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp654073 
End bp655176 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID640555650 
Productmethylthioribose-1-phosphate isomerase 
Protein accessionYP_001236822 
Protein GI148252237 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCG ACGGCAAGCA TTATCGCAGC ATCTGGCTCG ATGCCGACGG CTGGTCTGTC 
TGCGCGATCG ATCAGCGCCG GTTGCCGCAT GAATTCGTGC TGGCGAAGAT CACGACCTGC
GAGGAGGCGG CGGACGCGAT CCGCAGCATG CTGGTGCGTG GTGCGCCACT GATCGGCGCC
ACCGCCGCGT TCGGCATGGC GCTGGCGATG CGCGACGACC GCTCCGATCC GGGCATCGAC
CGCGCCTATG AGATGCTGAT CGCGACGCGT CCGACCGCGA TCAATCTCAA ATGGGCGCTC
GACACGATGC GCACGATGCT GCGCCGGCTG GCGCCGTCGG AGCGGCGTGA CGCCGCCTAT
GCGCGCGCGG TCGACATCGC CGGCGAGGAT GTGACGATCA ACCAGGGCAT CGCCAAGCAC
GGCCTCGCGC TGATCGAGGC GGCCGCGGCG CGCAAGACGC CGGGCGAGGT CGTGAACGTG
CTCACCCATT GCAACGCCGG CTGGCTCGCG ACCGTCGACT GGGGCACGGC GACGGCGCCG
ATCTATCTCG CGCATGATCG CGGCATTCCG ATCCATGTCT GGGTCGACGA GACCCGGCCG
CGCAACCAGG GCGCCTCGCT CACTGCCTGG GAGCTCGGTC ATCACGGGGT GGCTCATACC
GTCATCCCCG ACAATACAGG CGGCCATCTG ATGCAGCACG GCATGGTCGA TCTCGCCATC
GTCGGCACCG ACCGCGTCGC GGCCAATGGC GATGTCTGCA ACAAGATCGG TACCTATCTG
AAGGCGCTCG CGGCCTACGA CAATGGCGTG CCGTTCTATG TCGCGCTGCC ATCGCCGACG
ATCGACTTCG CGGTCGGCGA GGGGCGGCAG ATTCCGATCG AGCAGCGCAG CGCCCAGGAG
GTCACCGAGA TGACCGGCCG CACGGCGGAC GGTCGCATCG AGACCGTGCG GATCGTTCCT
CCGGGATCGC CAGTGGCGAA TTACGGCTTC GACGTTACCC CGGCCCGGCT GGTGACGGGA
TTGATCACCG AGCGCGGCGT CCTGCAGGCC GACGGCGCGG CACTGGCGGC GGCATTTCCG
GAGCGGAGCA GCGCGGCGAA CTAA
 
Protein sequence
MKVDGKHYRS IWLDADGWSV CAIDQRRLPH EFVLAKITTC EEAADAIRSM LVRGAPLIGA 
TAAFGMALAM RDDRSDPGID RAYEMLIATR PTAINLKWAL DTMRTMLRRL APSERRDAAY
ARAVDIAGED VTINQGIAKH GLALIEAAAA RKTPGEVVNV LTHCNAGWLA TVDWGTATAP
IYLAHDRGIP IHVWVDETRP RNQGASLTAW ELGHHGVAHT VIPDNTGGHL MQHGMVDLAI
VGTDRVAANG DVCNKIGTYL KALAAYDNGV PFYVALPSPT IDFAVGEGRQ IPIEQRSAQE
VTEMTGRTAD GRIETVRIVP PGSPVANYGF DVTPARLVTG LITERGVLQA DGAALAAAFP
ERSSAAN