Gene BBta_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0622 
SymboltyrB 
ID5150579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp625198 
End bp626406 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content61% 
IMG OID640555627 
Productaromatic amino acid aminotransferase 
Protein accessionYP_001236799 
Protein GI148252214 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGA TGTTGATCAA TCTGTCTCCA ACGCCGCCCG ATGCTGTCAT GCTGGCGGCC 
AGACTGTTTG CGGAAGACCC CAGGCCTCAC AAAGTCAATC TCGGCATTGG CATGTACTAT
GACGAGGAAG GCCGGATTCC TCAATTGGCA GCGGTGCGCG AGGCTGATCA TCGCCTTCGA
TCGCGCAACC GGCCGTGGCC CTATCTGCCC GCGGAGGGGT TGGTCGATCT GAAGAACAAG
GCCATGCCGG TCGTGTTTGG CGAAGACCAG GCGGACGATC TGCGCCGGCG CACGGCGTGG
ATCCAGACTG TCGGTGGTAC AGGCGCCGTT CGCATCGGAG CGGAGCTCGC CCGAGCGATC
GCGCCGGACG CGATGGCATC GATCAGCGAT CCGAGCTGGC CGAATCACGA AGCAATCTTT
CGCGCTGTCG GGGCCCGGGT TTCGAGCTAC AGATATTACG ACGTCGAATC CTGCAACATC
GATGTCGACG GCATGCTTCA GGATCTCGGT CGTCTTCCCC GGGGCACCGT CGTTGTGCTT
CATGGGTGTT GCCACAACCC GACGGGATTC GATCCGACGC CGGCGCAATG GAATCACATC
GCGCAGGTGC TGGCGGATCG CGGCCTGATT CCCTTCATCG ATCTGGCTTA TCAGGGATTT
GGCGAAGGGC TTGAGGCCGA CGCGCAGTCG GTTCGCATCA TAGCTCAATC GTGCAATCTG
ATTTTCGTCA GCGTCTCTTT CTCGAAATCG TTCTCTCTTT ACGGAGAGCG TGTTGGATTA
TTGTTCGTGG TTACCGAGAG CGAGGCCCAG GCGGCACTCG TCGGCGAACG CGCTCGCGCG
GTCTCACGGG CGTTATATTC CAGCGCGCCA AGCAACGGAG CTCTCCTCAT CGCCGAGGTT
CTGGGCGATC CGCAATTGAA GACGACGTGG ATCGACGAGC TCGATGCCAT GCGCCGGCGT
ATCCTGCTGA TGAGGGCTGA GCTCGTCGAC CAGCTCGCTG GCGGCAATCG AGGAGCAAAT
TTCGCGCCGA TCAAGGCGCA GCGCGGGCTG TTCTCGTATT CAGGCCTGAC CCGCACCGAG
ATCGAGCGGC TGAGAGTCGA CCACGCGGTT CACGCGGTGG CCGATGGGCG GATCTGTCTG
GCGGCGCTCA ATGCGGGGAA CCTTCCGTCG GTCGCTGCCG CAATTCGACA GGTTTCGAGC
CGGCATTGA
 
Protein sequence
MQAMLINLSP TPPDAVMLAA RLFAEDPRPH KVNLGIGMYY DEEGRIPQLA AVREADHRLR 
SRNRPWPYLP AEGLVDLKNK AMPVVFGEDQ ADDLRRRTAW IQTVGGTGAV RIGAELARAI
APDAMASISD PSWPNHEAIF RAVGARVSSY RYYDVESCNI DVDGMLQDLG RLPRGTVVVL
HGCCHNPTGF DPTPAQWNHI AQVLADRGLI PFIDLAYQGF GEGLEADAQS VRIIAQSCNL
IFVSVSFSKS FSLYGERVGL LFVVTESEAQ AALVGERARA VSRALYSSAP SNGALLIAEV
LGDPQLKTTW IDELDAMRRR ILLMRAELVD QLAGGNRGAN FAPIKAQRGL FSYSGLTRTE
IERLRVDHAV HAVADGRICL AALNAGNLPS VAAAIRQVSS RH