| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0616 |
|---|
| Symbol | |
|---|
| ID | 5150670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 617475 |
|---|
| End bp | 618932 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640555622 |
|---|
| Product | L-lysine 2,3-aminomutase |
|---|
| Protein accession | YP_001236794 |
|---|
| Protein GI | 148252209 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCA ATCATCGCCT TGCACTGATC CAATTGGAAA GGGCCGCACG CATGCTACAG
GTCTCTGATC TCCCTCGTAC GACCGGAATG CAGCCACATG TCGCGCAACC ACCGGAGCGA
TTGATCTATT ACACCAACCA TCGCCTGTCG CAGGTGCCGC AGCTCAAGTC TCTGCCGCCG
CGTCTGGTTC GTGGCATCCA TCTCGCGGCA ATGGTGTTTC CGTTCAAGGT CAACAGTTAC
GTCCTCGACA ATCTGATCGA TTGGGGGGCG GCTCCGGATG ACCCGATGTT CCGGTTGGTC
TTCCCGCATC CAGACATGCT GCAGGATGGC GATCGGGAGG TCCTTGATGA TCTTCTTGAG
CGAGGGGATG AAGTCGCGAT CGCCGCCGAA GTGCAGCGTA TCCGTGCGGA CATGAATCCG
CACAGCTCCG ACCAGATCGT CAATGTTCCG CTGTTCGAAG GGGCCTCCCT GGAAGGCGTG
CAGCACAAAT ATGACGAGAC GGCATTGTTC TTTGCCAAGC AGGGCCAGAC CTGCCACTCT
TATTGCTCGT TCTGCTTTCG ATGGCCGCAG TTTGTGGATT CGGCCGTCGA CCGGTTCGAG
GCGCGGGACG GAGAGCGGCT CTACGCCTAT CTGCGGACAC GTCGCGACAT CACGGATGTG
CTGCTCACGG GCGGGGACCC GTTCGTCATG AGCAGCCGGC GGCTGGCCGA TTACCTCGAG
CCGCTGCTGG CGCCGGAGTT CTCACATGTG ACGAACATCC GTATCGGCAC CAAGGCTTTG
TCGTATTGGC CGCAGCGATT CTATGTCGGC GCGGAGGCGG AGGAACTGAA CCGGCTGTTG
GTTCGGGTCG CCGATTCAGG AAAGCAGGTC GCTGTCATGG CGCATGTCAA TCACTGGCGT
GAGCTGACGC CCGAGCCGGT TCATCGGGCC GTCGAGGCGC TGAGAAGGTC CGGTGCGGTG
ATCCGCACGC AAAGTCCGGT GCTGCGCCAT GTCAACGATG ATGTCGCGGT GTGGCGTCGC
AATTGGCGCG ACCAGGTCGC GATGGGAATG ATCCCGTATT ACATGTTCGT CGAGCGCGAT
ACCGGCGCGA ACCACTACTT CCGCATCAGC CTCGATCGCG CGCTGGCGAT CTACCAGGCG
GCCGCTGCCG CGGTGTCGGG GATTTGCCGC ACGGCGCGCG GGCCGGTCAT GAGCGCGGGG
CCGGGCAAGA TCCACGTTCT CGGCCGGCTT GCGATCGGAA ATGACGACTA TTTCGTGCTG
TCGTTCCTGC AGGCAAGGCG CAAGGAGTGG CTGCATCGGC CATTCCTGGC CAAATATTCT
GCAGATGCGG CCTGGATCAA CGAGCTCGTG CCCCCCGAAG GCGAAGACGG CTTCTTTTTC
GACAGGCCGT ACGCCGAGCT CTTGGCGCAG AGAAGCGGCG AACATCGCCT GGAAGCCGAG
GAGGTCGGAC ATGAGTGA
|
|---|
| Protein sequence | MDVNHRLALI QLERAARMLQ VSDLPRTTGM QPHVAQPPER LIYYTNHRLS QVPQLKSLPP
RLVRGIHLAA MVFPFKVNSY VLDNLIDWGA APDDPMFRLV FPHPDMLQDG DREVLDDLLE
RGDEVAIAAE VQRIRADMNP HSSDQIVNVP LFEGASLEGV QHKYDETALF FAKQGQTCHS
YCSFCFRWPQ FVDSAVDRFE ARDGERLYAY LRTRRDITDV LLTGGDPFVM SSRRLADYLE
PLLAPEFSHV TNIRIGTKAL SYWPQRFYVG AEAEELNRLL VRVADSGKQV AVMAHVNHWR
ELTPEPVHRA VEALRRSGAV IRTQSPVLRH VNDDVAVWRR NWRDQVAMGM IPYYMFVERD
TGANHYFRIS LDRALAIYQA AAAAVSGICR TARGPVMSAG PGKIHVLGRL AIGNDDYFVL
SFLQARRKEW LHRPFLAKYS ADAAWINELV PPEGEDGFFF DRPYAELLAQ RSGEHRLEAE
EVGHE
|
|---|
| |