Gene BBta_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0517 
Symbol 
ID5148883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp508974 
End bp509393 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content59% 
IMG OID640555532 
Productputative response regulator receiver (CheY-like protein) 
Protein accessionYP_001236705 
Protein GI148252120 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.355984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.550913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACG AGCTCCTCGT GATCGAAGAT GCCGACGTGC ATCTCTCCAT CCTCAGAAAG 
ATTGCGACCC AGGCCGGCTT CAACACGACG GGCGTAAGTT CGGTTGACGC AGCTTCCACC
ATCCTTCGAA CGAGGCACTT CGATTGCGTC ACGCTGGATC TGTCGCTCGG CGAGCGATCC
GGCACGGAAG TGCTCCAACG GCTCGCCGAG CTCAAATATC GCGGCCCTGT TCTCATCATC
AGCGCCTCCG AGAACGACAG GCTCGACGCC TCGGTACGCA TCGGCAATTT TCTTGAGCTG
AACGTCTGCC CACCGTTTTC GAAGCCGATC AATCTGCCTT TGCTTCGGCA GACGCTCAAG
CAGATCGCGA GCGAGACCGA TCGCCAGAAG CTGGTCCGAC GGCAGGCTGG TAGAGGATGA
 
Protein sequence
MRNELLVIED ADVHLSILRK IATQAGFNTT GVSSVDAAST ILRTRHFDCV TLDLSLGERS 
GTEVLQRLAE LKYRGPVLII SASENDRLDA SVRIGNFLEL NVCPPFSKPI NLPLLRQTLK
QIASETDRQK LVRRQAGRG