Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0497 |
Symbol | |
ID | 5151751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 492091 |
End bp | 492957 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640555514 |
Product | spermidine/putrescine ABC transporter permease |
Protein accession | YP_001236687 |
Protein GI | 148252102 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.157918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.264404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACG CCGTGCTCTC AGCCCCGGTC GCGACGCCTG CGCCCGATCG CGAGCGGCTC GCCGCGTTCG GCTTTGTCGC GCCGTCGCTG CTGATCACCG CGCTGGTGTT CGTGTTGCCG CTGGCGCTGC TGCTCGGCGT CAGCGTGCTC GATCCGAAGG GCGGCGGCAC CTCGGCGCAT TACGCCCGGC TGCTCGGCAC GCCCTATTAT CTCGGCGTCA TCTGGAACTC GCTGCGGCTC GGCCTGCTGA CGACCCTGAT CGCCTTCCTC ATCTCTTATC CCGCGGCGTT TGCGCTGGCG CGTGCGCGCG GGCCGTTGCG CTCGATCCTG CTGGCCACCT TATTCCTGCC GCTCGCGGCC TCTGTCATCG TCAAGGCCTT CGCCTGGACC ATCCTGCTGC GCAGCGATGG TCTCATCAAC ACGGTGCTGA TCGCGGCGGG GATCATCGAG GATCCGATCC GCATGATCTT CACCCAGACC GCATTGATCG TTGGCGCCGT CAACATCTTC CTGCCGTTCA TGGTGCTGCC GATCTATGCC GTGGTGGCGC AGCTCGATAG CCGCTATGCA GAAGCTGCGG CAACGCTCGG CGCCTCGCCG CTCGTCGTGT TCTTTCGCGT CATCCTGCCG CTGACCTTGC CCGGCATCGT TGCCGGTGTC GCGCTGGTGT TCTCGCTGTC GGTGTCGGCC TATGTGGTGC CGACGCTGCT GATCGGCGAG AAATATCCGA CGCTCGCCAC CACCATCGCC AAGGCTTACC TGCTGGCGCG CGAGCCCGGC TTCGGCGCCG CCGCCGGCGT CGTACTGCTG GCAATCGCGA TCATCGTCGT TGCACTCAGC GCGCTGCTGT CGCGGGAGCC GAAATGA
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Protein sequence | MTDAVLSAPV ATPAPDRERL AAFGFVAPSL LITALVFVLP LALLLGVSVL DPKGGGTSAH YARLLGTPYY LGVIWNSLRL GLLTTLIAFL ISYPAAFALA RARGPLRSIL LATLFLPLAA SVIVKAFAWT ILLRSDGLIN TVLIAAGIIE DPIRMIFTQT ALIVGAVNIF LPFMVLPIYA VVAQLDSRYA EAAATLGASP LVVFFRVILP LTLPGIVAGV ALVFSLSVSA YVVPTLLIGE KYPTLATTIA KAYLLAREPG FGAAAGVVLL AIAIIVVALS ALLSREPK
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