Gene BBta_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0490 
Symbol 
ID5155827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp484785 
End bp485282 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content68% 
IMG OID640555508 
ProductSecC motif-containing protein 
Protein accessionYP_001236681 
Protein GI148252096 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.192209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.279361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGTC CCTGCGGATC GGACCTTCCC CTTGACCGCT GCTGCGGTCC CTACCTCAGC 
GGCGATGCGA CGCCGCCGAC GGCCGAGGCG CTGATGCGCT CGCGCTACAC GGCCTATACG
CGCGGCGATA TCGGCTACAT CGCGGCGACG CTTGCCGCCG ACAAGCGCGC GGCGTTCGAC
GCTGCTGCGG CAAGGCAATG GGCCTCGCGC GCGACTTGGC TCGGCCTGCG CATCGTGTCG
ACCGCGCGCG GCCAGATCGA TGATTCCGAC GGTGTCGTCA GCTTCGTTGC CAGCTACCGC
GAGGCCGGCA AGACCATTGA GCATCACGAG GTCTCGCAGT TTCGCCGCGA TGACGACGGC
GCCTGGCGGT TCGTCGCGGG TGACACGCGG GCCGTCATTG TGGAGCCGAA GCGCACCGCC
GGTGCAGCGA AGGTCGGCCG CAACGATCCG TGTCCGTGCG GCAGCGGCAA GAAGTCCAAA
TTCTGCTGCG GGCGCTGA
 
Protein sequence
MSCPCGSDLP LDRCCGPYLS GDATPPTAEA LMRSRYTAYT RGDIGYIAAT LAADKRAAFD 
AAAARQWASR ATWLGLRIVS TARGQIDDSD GVVSFVASYR EAGKTIEHHE VSQFRRDDDG
AWRFVAGDTR AVIVEPKRTA GAAKVGRNDP CPCGSGKKSK FCCGR