| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0471 |
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| Symbol | hypF |
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| ID | 5153343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 467771 |
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| End bp | 470245 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640555489 |
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| Product | carbamoyl phosphate phosphatase, (NiFe) hydrogenase maturation protein |
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| Protein accession | YP_001236662 |
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| Protein GI | 148252077 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0655217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGGCG GCAGTATGAG CACGCAGCCC GCCATCGCCA ACGCCGCTGC TCTGGAAAGC
GTCCAGATCA GGGTGCGCGG TCGCGTGCAG GGCGTCGGTT TCCGGCCGAC CGTTTGGCGC
CATGCCCGTG AAGTTGGCCT GGACGGTGAA GTGCTGAACG ACGGAGAGGG AGTGCTCATC
CGGGCCCGCG GCCAAGGGAA GGACATCGAG ACGTTGGTCA GGCGCTTGCG CGACGAGGCA
CCGTTGCTCG CTGCGATCGA AGCGATCGAG GTCGAGCCCT TTACTGGAAG ACTGGCGCCT
GGGTTCCGCA TCATCGAGAG CAACAGAAGT GAGGCCCGCA CCGAGATTTC GCCCGACGCT
GCCATCTGTC CCGCGTGTGC GGCTGAAGTG CTCGATCCGT TCGAGCGCCG CTTCCGCTAC
GCTTTCACCA ACTGCACACA TTGCGGCCCA CGCTTCACCA TCATCCGCTC GATCCCCTAT
GACCGCAGCG CCACGACAAT GGCCGCCTTT CCCGTGTGCG CCGAATGCGC CGCCGAATAT
GGCGACCCGG CCAATCGGCG CTTCCACGCC GAGCCTATCG CCTGCCATGC CTGCGGCCCG
AAAGCGCAGC TCGTCCGCTT CGATGGACGA GCCTTGACCT ACGAGCAGCA TTCGATGTTC
GATGACGTCG ATGCTGCAAT GAGCTTGATC CAGAAAGGCG AAATCGTCGC CGTCAAGGCG
CTCGGCGGCT ACCAGCTCGC CTGCGATGCT ACAAGGCTCG ACACTGTCGA GCGGCTGCGG
CTGCTTAAGC GGCGCGAGGT CAAGCCCTTC GCCCTCATGG CGCGCGACCT CGATGTGATC
CGCCGATTCT GCGCCGTCAG CCCGGACGAG GAGGAAGCGT TGTGCTCGCC GGCAGCGCCG
ATCGTGCTCC TCGATGCGGC CGGTCCGGAA CGCTTGCCTG AGGCTGTTGC TCCCGGAATG
CGGATGCTCG GCTTCATGCT CCCCTCGACG CCGCTGCATG TGCTCATGTT CCGCCGCATG
CCGCGCCCCG TGATCATGAC CAGCGGCAAC CTCTCGGACG AACCGCAAGC GATCGGCGAC
GCGGAGGCAG CGCGCAAGCT CGGGACCATC ACCCCTTACG CCCTCGTTCA CGACCGCGAA
ATCGCCAATC GCGTTGACGA TTCCGTCATG CGCGTCATGG ACGGGCGCAT GCGTCTGTTA
CGCCGCGCGC GCGGCTACGC GCCGGCCTCC ATTTCCCTGC CGAAGGGCTT CGAGGACTCG
CCCGACATCC TCGCCTACGG CCCGGAGATG AAGGCGACTT TCTGTCTGGT AAAGGAAGGC
CGGGCGGTGC TTTCCCAACA TCAGGGCGAT CTCCAGGACG CCGCGACCTG GGACGACTAC
AGGAAGAATC TCGCGCTCTT CCGGGATCTC TTCGCGCACG ATCCGCAGGC GCTGGCCTGC
GACATGCACC CGGAATACCT TTCCGCGAAG CTCGCGCGAA AACGTGCCAG TGAGGACAGT
CTGGCGCTCA TCGAGGTCCA GCATCACCAC GCCCACATTG CCGCGTGTCT CACCGAGAAC
GCACGCGCGC TTGACGCGCC ACGCGTGCTT GGCATCGCTC TCGACGGGTT GGGCTACGGC
ACGGACGACA CAATCTGGGG TGGCGAATTC CTGTTGTGCG ACTACCGCGG TTTCCAGCGT
GTCGGCACCT TCCGGCCGGT GGCCATGGTA GGCGGTGCTG CCGCCTCGCG CGAGCCGTGG
CGCAACCTTT ACGCGCATCT GACCGCGCAG ATGGGATGGG CCGCCTTCGC CATGAATTTT
AGGCAGCTCC CATTGTTCGA GCGGCTGGCC GCCAAGCCTC GCGCGGTCTT GGACACGATG
ATCCACGATC ACATCAATTC GCCTCTTGCT TCCTCCTGCG GCCGCCTTTT CGACGCGGTT
GCGGCCGCGC TCGACGTCTG CTTCGAGCGC CAGGCCTATG AGGGCGAGGC CGCGGCGCGA
CTCGAGGCGA TCGCATGTCC AAAGACGCTC GCAGAGGAAG ACGACAGTCT CTGCTATCCG
ATGCCGATTC CCGTTCTTAA GGGATCTGGC CTCCCGTATA TTGAGCCGCT TGCCATGTGG
AACGCGATCC TAGGCGATCT GATCCTAGGC ACGCCTCAAC CGATCATTGC TGCGCGTTTT
CACAAGGCGC TCGCCAGGTC CATTGTCACA ATGGCAATCC AGCTGGCGCG GCGAGACGAT
GAAGACGCGC AGCCGCGTTT CGACACGGTG GCGCTGTCGG GTGGCTGCTT TCAAAACCGC
ATTCTTCTGG AACAGACGGT CCGTCGTCTC GAGGAAAAGA AATTCAAAGT TCTTACGCAT
GCCAAGGTGC CCGCCAACGA CGGCGGGGTG GCTCTCGGCC AAGCAACCAT CGCCGCCGCG
CATCTCATCG ATGCGGAACG AACACGGCGC AAGGGAGGAA CATCATGTGC CTTGGAATTC
CCGGACGGAT CGTAA
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| Protein sequence | MGGGSMSTQP AIANAAALES VQIRVRGRVQ GVGFRPTVWR HAREVGLDGE VLNDGEGVLI
RARGQGKDIE TLVRRLRDEA PLLAAIEAIE VEPFTGRLAP GFRIIESNRS EARTEISPDA
AICPACAAEV LDPFERRFRY AFTNCTHCGP RFTIIRSIPY DRSATTMAAF PVCAECAAEY
GDPANRRFHA EPIACHACGP KAQLVRFDGR ALTYEQHSMF DDVDAAMSLI QKGEIVAVKA
LGGYQLACDA TRLDTVERLR LLKRREVKPF ALMARDLDVI RRFCAVSPDE EEALCSPAAP
IVLLDAAGPE RLPEAVAPGM RMLGFMLPST PLHVLMFRRM PRPVIMTSGN LSDEPQAIGD
AEAARKLGTI TPYALVHDRE IANRVDDSVM RVMDGRMRLL RRARGYAPAS ISLPKGFEDS
PDILAYGPEM KATFCLVKEG RAVLSQHQGD LQDAATWDDY RKNLALFRDL FAHDPQALAC
DMHPEYLSAK LARKRASEDS LALIEVQHHH AHIAACLTEN ARALDAPRVL GIALDGLGYG
TDDTIWGGEF LLCDYRGFQR VGTFRPVAMV GGAAASREPW RNLYAHLTAQ MGWAAFAMNF
RQLPLFERLA AKPRAVLDTM IHDHINSPLA SSCGRLFDAV AAALDVCFER QAYEGEAAAR
LEAIACPKTL AEEDDSLCYP MPIPVLKGSG LPYIEPLAMW NAILGDLILG TPQPIIAARF
HKALARSIVT MAIQLARRDD EDAQPRFDTV ALSGGCFQNR ILLEQTVRRL EEKKFKVLTH
AKVPANDGGV ALGQATIAAA HLIDAERTRR KGGTSCALEF PDGS
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