Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0448 |
Symbol | cbbG |
ID | 5154920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 448309 |
End bp | 449316 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640555467 |
Product | glyceraldehyde-3-phosphate dehydrogenase |
Protein accession | YP_001236640 |
Protein GI | 148252055 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.627276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0973996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGTCA GGGTTGCCAT CAATGGATTC GGGCGCATCG GGCGCAACGT GCTGCGCGCG ATCTACGAGT CGGGGCGGGG CGATATCGAA GTCGTCGCGA TTAACGACCT CGGCTCGGTC GATATTAACG CCCATCTGCT GCGATACGAC AGCGTGCACG GAACTTTCCC AGGCGCCGTC AAGGTGAACG GCGCCAGCAT TGATATTGGT CGCGGCTCGC CGATCCGTGT GACCGCCGAG CGCGACCCCA AAACACTGCC ATGGAAAGAC GTAGACATCG CGCTTGAATG CACCGGCATC TTCACCGCGC GCGAGAAGGC CTCGCTACAC CTCGAGAACG GCTCGAAGCG CGTCCTCGTC TCCGCACCCG CCGCGGGCGC CGACAAGACA ATCGTCTTCG GCGTCAACCA CAATAGCCTG TCGCCGGGAG ACAATGTCGT TTCCTGCGCG TCCTGCACCA CCAATTGTCT CGCCCCGGTT GCGGCCGTGC TTCATCGGAC CATCGGCATC GACAAGGGAT TCATGACTAC CATCCATAGC TATACTGGCG ACCAGCCGAC ACTGGATACC CTGCACAAGG ATCCGTACCG AGCCCGCGCC GCCGCGATGT CGATGATTCC AACCTCGACG GGAGCGGCCA AGGCCGTGGG CCTGGTGCTG CCAGAGCTGA ATGGGAAGCT CGACGGTGTC GCGATCAGAG TGCCGACGCC GAACGTTTCG GTCGTCGATT TTAAGTTCAT CGCAAGCCGC GAAACGACCG CCGAGGAGAT CAACAGCGTC GTCCGGACAG CTGCTGGCGC GGACCTTGAG GGTATCCTGG GCTTCACGGA CGAACCGCTG GTCTCTGTGG ATTTCACGCA TGATCCGCGC TCTTCGATCG TCCATATGGA TCAGACCAAG GTGATCGACG GGCGCCTCTG TCGCGTCATG TCGTGGTACG ACAATGAGTG GGGCTTCTCG AACCGGATGG CCGATACAGC TGTCGCGATG GGGAGGCTCA TCGGATGA
|
Protein sequence | MTVRVAINGF GRIGRNVLRA IYESGRGDIE VVAINDLGSV DINAHLLRYD SVHGTFPGAV KVNGASIDIG RGSPIRVTAE RDPKTLPWKD VDIALECTGI FTAREKASLH LENGSKRVLV SAPAAGADKT IVFGVNHNSL SPGDNVVSCA SCTTNCLAPV AAVLHRTIGI DKGFMTTIHS YTGDQPTLDT LHKDPYRARA AAMSMIPTST GAAKAVGLVL PELNGKLDGV AIRVPTPNVS VVDFKFIASR ETTAEEINSV VRTAAGADLE GILGFTDEPL VSVDFTHDPR SSIVHMDQTK VIDGRLCRVM SWYDNEWGFS NRMADTAVAM GRLIG
|
| |