Gene BBta_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0448 
SymbolcbbG 
ID5154920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp448309 
End bp449316 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content61% 
IMG OID640555467 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_001236640 
Protein GI148252055 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.627276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0973996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCA GGGTTGCCAT CAATGGATTC GGGCGCATCG GGCGCAACGT GCTGCGCGCG 
ATCTACGAGT CGGGGCGGGG CGATATCGAA GTCGTCGCGA TTAACGACCT CGGCTCGGTC
GATATTAACG CCCATCTGCT GCGATACGAC AGCGTGCACG GAACTTTCCC AGGCGCCGTC
AAGGTGAACG GCGCCAGCAT TGATATTGGT CGCGGCTCGC CGATCCGTGT GACCGCCGAG
CGCGACCCCA AAACACTGCC ATGGAAAGAC GTAGACATCG CGCTTGAATG CACCGGCATC
TTCACCGCGC GCGAGAAGGC CTCGCTACAC CTCGAGAACG GCTCGAAGCG CGTCCTCGTC
TCCGCACCCG CCGCGGGCGC CGACAAGACA ATCGTCTTCG GCGTCAACCA CAATAGCCTG
TCGCCGGGAG ACAATGTCGT TTCCTGCGCG TCCTGCACCA CCAATTGTCT CGCCCCGGTT
GCGGCCGTGC TTCATCGGAC CATCGGCATC GACAAGGGAT TCATGACTAC CATCCATAGC
TATACTGGCG ACCAGCCGAC ACTGGATACC CTGCACAAGG ATCCGTACCG AGCCCGCGCC
GCCGCGATGT CGATGATTCC AACCTCGACG GGAGCGGCCA AGGCCGTGGG CCTGGTGCTG
CCAGAGCTGA ATGGGAAGCT CGACGGTGTC GCGATCAGAG TGCCGACGCC GAACGTTTCG
GTCGTCGATT TTAAGTTCAT CGCAAGCCGC GAAACGACCG CCGAGGAGAT CAACAGCGTC
GTCCGGACAG CTGCTGGCGC GGACCTTGAG GGTATCCTGG GCTTCACGGA CGAACCGCTG
GTCTCTGTGG ATTTCACGCA TGATCCGCGC TCTTCGATCG TCCATATGGA TCAGACCAAG
GTGATCGACG GGCGCCTCTG TCGCGTCATG TCGTGGTACG ACAATGAGTG GGGCTTCTCG
AACCGGATGG CCGATACAGC TGTCGCGATG GGGAGGCTCA TCGGATGA
 
Protein sequence
MTVRVAINGF GRIGRNVLRA IYESGRGDIE VVAINDLGSV DINAHLLRYD SVHGTFPGAV 
KVNGASIDIG RGSPIRVTAE RDPKTLPWKD VDIALECTGI FTAREKASLH LENGSKRVLV
SAPAAGADKT IVFGVNHNSL SPGDNVVSCA SCTTNCLAPV AAVLHRTIGI DKGFMTTIHS
YTGDQPTLDT LHKDPYRARA AAMSMIPTST GAAKAVGLVL PELNGKLDGV AIRVPTPNVS
VVDFKFIASR ETTAEEINSV VRTAAGADLE GILGFTDEPL VSVDFTHDPR SSIVHMDQTK
VIDGRLCRVM SWYDNEWGFS NRMADTAVAM GRLIG