Gene BBta_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0371 
Symbol 
ID5154440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp370194 
End bp370916 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID640555390 
Producthypothetical protein 
Protein accessionYP_001236564 
Protein GI148251979 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4978] Transcriptional regulator, effector-binding domain/component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.548098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.611025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA GCACTTTCCG CCTCGTTCTG GCCGTGAGCT CGGTCGCCGT TGCGCTGGGC 
GGTCCGGTCG CCCGGGCGCA GGCGCCGGCA GCCCCCACGG CTCCGGCGGT ATCGGCGACG
CCCTCCCCTG CCCCGAGCAC GCCCCCGGCG CCGGCCGCGG CGGCCCCCGC AGCCAGCCCG
ACGCCGGCTG CCAGCGCCAG CCCCTCACCG CCACCGTCTC CCGCTCCCGG CCAGGCGCCG
GCCGCGGCGC CCACCCAGAC GACCGACGCC TTCGGCGACG AGATCAAGCT CGAGGCCAAG
AAGGTGGTCC TCGTGAAGGG CACCGCCAAT TGGGACAATG CCTTCGACAC GCTGATCGAT
TCCTTCAAGG CGCTGTCAAC CATGTTGGAC AAGCAAGGCG TGAAGCCCGC CGGCAACGGC
ATGATCGTCT ACACGTCGAC CGACGACAAC GGCTTCACCT TCCTGGCCGA GATGCCGATC
GAGCAGGAGC CGAAGACGCT CGGCAAGGGC ATGAGCATCG GCCAGTCGCC GGAGGGCAAG
GCCCTGAAGT TCGTGCATCG CGGCTCCTAC GACAACATGG ACAACACGTA TGAGGCGATC
ACGAACCATC TCGACGAGCG CCGCCTCGAA GCCAAGGACA CGTTCATCGA GGAGTATATG
ACCGACCCCT TGAAGACCGC CGAGGACAAG CTCGTCATCA ACGTCTATGT GCCGCTGAAA
TGA
 
Protein sequence
MNFSTFRLVL AVSSVAVALG GPVARAQAPA APTAPAVSAT PSPAPSTPPA PAAAAPAASP 
TPAASASPSP PPSPAPGQAP AAAPTQTTDA FGDEIKLEAK KVVLVKGTAN WDNAFDTLID
SFKALSTMLD KQGVKPAGNG MIVYTSTDDN GFTFLAEMPI EQEPKTLGKG MSIGQSPEGK
ALKFVHRGSY DNMDNTYEAI TNHLDERRLE AKDTFIEEYM TDPLKTAEDK LVINVYVPLK