Gene BBta_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0250 
Symbol 
ID5149847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp258156 
End bp259730 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content65% 
IMG OID640555274 
Productputative alkaline phosphatase (phoD) 
Protein accessionYP_001236451 
Protein GI148251866 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC ACCTTTCGCG CCCGCAGCTG TCCAGGCTGT CCCGCCGCCG ATTCCTCTCG 
ACGGCAGCTG CCGCCGGCGT CACGACGCTG TCGATGCCCT ATCTGAGCCG CGCCGCCGAC
CGGCCGCAGA TCACGCATGG TGTCCAGTCC GGCGACGTCA GCATGGATGG CGGCGTGGTC
TGGGCCCGTG CCGACCGCCC GTCGCAAATG CTGGTCGAGG TCGCGACGAC AGAGTCGTTC
AAGAACGCGC GCAGCCTGCC GCCGATCGCG GCGCTGCCCG AAAGCGATTT TACCGCCAAG
ATGCTGCTGG AGAACCTCCC GAGCGGCCAG GACATCTTCT ACCGCGTCAA ATTCCGCGAC
CTCTCGCACA GCGCCGTCGA AAGCGAGGCG GTGGTCGGGC GCTTCCGCAC CGCGCCCGGC
AACAAGCGCG ACGTCTCGTT CGTCTGGGGC GGCGACGTGG CAGGACAAGG ATGGGGCATC
AATCCCGACG ATGGCGGCAT GTTCACCTTC GCCACCATGA AGAAGCACCG GCCCGACTTC
TTCCTCCATT CCGGCGACAC GATCTATGCC GACGGTCCGA TCAAGTCCGA GGTCAAGCTG
CCGGACAACA AGGTCTGGAA AAACCTGACG GTGGAAGAGA AGGCCAAGGT CGCCGAGACG
CTCGACGAAT TCCGGGCGGC TCATAAGTAT AACTTCCTCG ACGAGAACGT CCGCGCCTTC
AATGCCGAGG TGCCGATCTT CGTGCAGTGG GACGATCACG AGGTGACCAA CAACTGGTCG
GCCTCCAAGG AGCTGCCGGC GGCCTACAAG GAGCGCAACA TCCAGCTGCT CGCCGCGCGC
GCGGCCCGCG CCTTCCACGA GATGTATCCG ATGCGCGAGA GCATCGCCGA GCCTGGCCGG
GTCTATCGCA CCATCAATTA CGGCCCGCAT CTCGACGTCT TCGTGCTCGA CGAGCGCAGC
TATCGCGGCG CCAACGGCCC GAACCTCGAG GACAAATATG GCCCGTCGTC CTATTTCATC
GGGCCCGAGC AGATGCGCTG GCTGAAGCAG GCGCTGCTGA ACTCGCGCGC GACCTGGAAG
GTGATCGCCT CCGACATGCC GCTCAGCCTG ATCGTCTATG ACGACGCGGC CAACAAGAAG
GGCTCTGAGG CGATTGCGCA GGGCGACGGT CCGGCGCGCG GGCGCGAGCT GGAGATCGCC
GAGATCCTGC GCTTCATCAA GACCGCGCCG ATCCAGAACA CGGTGTGGCT GACGGCGGAC
GTGCACTACG CCGCCGCGCA TTACTATGAT CCGAACAAGG CGCAGTTCCA GGACTTCGAG
CCGTTCTGGG AGTTTGTCTC GGGCCCGCTG CATGCCGGCA CGTTCGGCCC GAACGAGCTC
GACAACACTT TCGGCCCCGA GGTGCGCTTC ATCAAGGCGC CGGGTCTCGA CAAGCAGAAC
CTGCCGCCGT CAGCCGGCAT GCAGTTCTTC GGGCACGTCA AGATCGAGGG CGAGACCGGG
CAGATGACCG TGACCCTGCG CGATCGCGCC GACGTCGCGC TGTGGTCGAC GACCCTTGAC
CCGAAGCTCG GCTGA
 
Protein sequence
MTIHLSRPQL SRLSRRRFLS TAAAAGVTTL SMPYLSRAAD RPQITHGVQS GDVSMDGGVV 
WARADRPSQM LVEVATTESF KNARSLPPIA ALPESDFTAK MLLENLPSGQ DIFYRVKFRD
LSHSAVESEA VVGRFRTAPG NKRDVSFVWG GDVAGQGWGI NPDDGGMFTF ATMKKHRPDF
FLHSGDTIYA DGPIKSEVKL PDNKVWKNLT VEEKAKVAET LDEFRAAHKY NFLDENVRAF
NAEVPIFVQW DDHEVTNNWS ASKELPAAYK ERNIQLLAAR AARAFHEMYP MRESIAEPGR
VYRTINYGPH LDVFVLDERS YRGANGPNLE DKYGPSSYFI GPEQMRWLKQ ALLNSRATWK
VIASDMPLSL IVYDDAANKK GSEAIAQGDG PARGRELEIA EILRFIKTAP IQNTVWLTAD
VHYAAAHYYD PNKAQFQDFE PFWEFVSGPL HAGTFGPNEL DNTFGPEVRF IKAPGLDKQN
LPPSAGMQFF GHVKIEGETG QMTVTLRDRA DVALWSTTLD PKLG