Gene BBta_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0183 
Symbol 
ID5149119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp188914 
End bp190161 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content68% 
IMG OID640555208 
Producthypothetical protein 
Protein accessionYP_001236386 
Protein GI148251801 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.33353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGCC CGCGTCATCC CAAGTCTCAC GGTCCCAGGT CTTTCGGCCT CAAGTCTCAC 
GGCCCGGACT CGCATGGGGT TGCCCGACGA ACGGCGCTGG GCCTGATCGT CGGCGCGCCG
CTGTTGTCGG CCTGCTCGGG CGTGCAGCAG GGCATGAGCA TCCCCAACCC GTTCGAGCAA
CCGACCGGCC CCTCCGGGCC ACCGCTACAA CCGGCGGTAG CCGGAAACGG CCAAGTCAAG
GTCGGGCTGC TGCTGCCCTT GTCGGCCTCG GGCAATGCGG GCATCGCGGC GCAGTCGATG
AAGAACGCCG CCGAGATGGC GCTGGCCGAG TTCCAGAACC CCAATATCCA GCTGTTGATC
AAGGATGACG CCGGCAGTCC GCAAGGCGCG CAACAGGGCG CACAGCAGGC CTGCGACGAG
GGCGCCGAGA TCATTCTCGG TCCGCTGTTC GCCGGCTCGG TGCCAGCGAC CGCCCAGGTC
GCGCGCACGC GCAACATCTC GGTGATCGCC TTTTCCACCG ATTCGAGCGT CGCCGGTCGT
GGCGTGTACC TGCTGAGCTT CCTGCCGGAG TCCGACGCGA TCCGTATCGT GGATTATTCG
GCGAGTGTCG GTAAGCGCTC CTTCGCGGCG CTGCTGCCCG ACAACGCCTA TGGCACGGTG
GTCGAAGGTG CGTTCAAGAC GGCGGTCAGC CGGCGCGGCG GCCGGATCGT GGCCTTCGAG
AAATATAGCG GCGATCGCAA CACGGCGGCG CGCACCGTGG CGCAGTCGCT CGGCGGTGCC
GACGCGCTGT TGCTGGCGGA CGACGGCGAT TCGGTAGTTG CGACGGCGGA TGCGCTGACG
GCGGCGGGGG CCAATCTGCG CAACATCCAG CTGCTCGGCA CCGGGCTGTG GGATAATCCG
CGGGTCTACA ACAGCGCCAG TCTCCAGGGC GGCCTTTACG CGGCGCCCGA TCCCGCAGGC
TTCCGCGCGT TTGCGGGACG CTATCGCACG CGGTTCGGCG GCGATCCCGT CCGGACAGCG
ACTCTGGCTT ATGATGCGGT CGCCCTCGTC GCGGCGCTGG CGCGAACGCA AGGCGCGCAG
CGTTTCGCGC CAGACGTGCT GACCAACGCG TCCGGCTTTG CCGGCATCGA CGGGTTGTTT
CGTTTCCGCA GCGACGGCAC CAACGAGCGC GGGCTCGCGG TCATGCGCGT CGGCTCAGGG
GGCGGGCAGG CTGTCGCCGG TGCGCCCAAG AGCTTTAACG CCACATAG
 
Protein sequence
MVGPRHPKSH GPRSFGLKSH GPDSHGVARR TALGLIVGAP LLSACSGVQQ GMSIPNPFEQ 
PTGPSGPPLQ PAVAGNGQVK VGLLLPLSAS GNAGIAAQSM KNAAEMALAE FQNPNIQLLI
KDDAGSPQGA QQGAQQACDE GAEIILGPLF AGSVPATAQV ARTRNISVIA FSTDSSVAGR
GVYLLSFLPE SDAIRIVDYS ASVGKRSFAA LLPDNAYGTV VEGAFKTAVS RRGGRIVAFE
KYSGDRNTAA RTVAQSLGGA DALLLADDGD SVVATADALT AAGANLRNIQ LLGTGLWDNP
RVYNSASLQG GLYAAPDPAG FRAFAGRYRT RFGGDPVRTA TLAYDAVALV AALARTQGAQ
RFAPDVLTNA SGFAGIDGLF RFRSDGTNER GLAVMRVGSG GGQAVAGAPK SFNAT