| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0130 |
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| Symbol | |
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| ID | 5149241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 131876 |
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| End bp | 133168 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640555156 |
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| Product | putative TRAP-type C4-dicarboxylate transport system, large permease component (dctM subunit) |
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| Protein accession | YP_001236334 |
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| Protein GI | 148251749 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA TCATTCTCGG CGCCACCTTC TTCGGCTTCC TGGTTCTCGG CGTCCCCGTC
GCCTTCGCCA TCGGCCTCTC GGCCATCTGC ACCATTCTGT ATGAAGGCCT GCCGGTGGCG
GTGATCTTCC AGCAGATGAT GTCGGGGATG AACATCTTCT CGTTCCTGGC CATCCCGTTC
TTCGTCTTCA GCGGCGAGCT GATGCTGCAT GGCGGCGTTG CCGACAAGAT CGTGCAGCTC
GCCAAGAACC TCGTCGGCCA CATCCGCGGC GGCTTGGGCA TGTCGAACGT CGTCGCCTGC
ACGCTGTTCG GCGGTGTCTC AGGCTCTCCG GTCGCCGACG TCTCCGCAAT GGGCGCGGTG
ATGATCCCGA TGATGAAGAA GGAAGGGTTC GACACCGACT ACGCCGTCAA CGTCACCACC
CACGCCTCGC TGGTCGGTGC GCTGATGCCG ACCAGTCACA ACATGATCAT CTATGCGCTC
GCCGCCGGCG GCAAGGTGTC GATCGGCGCG CTGATCGCCG CGGGTCTCCT GCCGGCGCTG
GTGCTGATGG TCTGCATGCT GGTCGCCGCC TATGCAGTCG CCGTGAAGCG CGGCTATCCC
GCGGGCAAAT TTCCCGGCTG GGCGGAGGTC TTCCGCTCGT TCGCAGCGGC GCTGCCGGGC
CTCTTGATCG TCGGCATCAT CCTGGCGGGC ATCCTCTCCG GCGTCTTCAC GGCCACCGAA
TCCGCAGCCG TCGCGGTCAC CTATACGATC CTGCTGACGT TCTTCATCTA CCGCACCATG
ACGCTGCAGA ACTTCCTGCG CGCCGCCGCC AAGGCGGTCA AGACGACCGG CGTGGTGCTG
CTCCTGATCG GCGTCTCGAC GATGTTCCAG TACCTGATGG GACTCTACGA GGTGGCCGAT
TTCGCCGGCG ACCTGATGAG CAAGGTTTCG ACGCAGCCCT GGATCATCTT CCTGCTCATC
AACGTCATCC TGTTCCTGCT CGGCACCTTC ATGGACATGG CGGCCACCAT CCTGATCTGC
ACGCCGATCT TCCTGCCGAT CGCGATGAAG GCCGGCATGG ACCCGGTGCA GTTCGGCATG
CTGATGCTGA TCAACTGTGC GCTGGGCCTC AACACCCCGC CGGTCGGCAC CACGCAGTTC
GTCGGCTGTG CCATCGGCGG CATCTCGGTC GGCGCCGTCA TGCGCACCAT CCTGCCGTTC
TACGCCGCAC TGATCGCAGC GCTAATGTTC GTGACCTACG TCCCTGCCTT CTCGCTGTGG
CTGCCGCGCC TCCTGATGGG CTACAAGGGA TAG
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| Protein sequence | MELIILGATF FGFLVLGVPV AFAIGLSAIC TILYEGLPVA VIFQQMMSGM NIFSFLAIPF
FVFSGELMLH GGVADKIVQL AKNLVGHIRG GLGMSNVVAC TLFGGVSGSP VADVSAMGAV
MIPMMKKEGF DTDYAVNVTT HASLVGALMP TSHNMIIYAL AAGGKVSIGA LIAAGLLPAL
VLMVCMLVAA YAVAVKRGYP AGKFPGWAEV FRSFAAALPG LLIVGIILAG ILSGVFTATE
SAAVAVTYTI LLTFFIYRTM TLQNFLRAAA KAVKTTGVVL LLIGVSTMFQ YLMGLYEVAD
FAGDLMSKVS TQPWIIFLLI NVILFLLGTF MDMAATILIC TPIFLPIAMK AGMDPVQFGM
LMLINCALGL NTPPVGTTQF VGCAIGGISV GAVMRTILPF YAALIAALMF VTYVPAFSLW
LPRLLMGYKG
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