| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BAS4806 |
|---|
| Symbol | dapF |
|---|
| ID | 2848459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus anthracis str. Sterne |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005945 |
|---|
| Strand | - |
|---|
| Start bp | 4699728 |
|---|
| End bp | 4700594 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637508064 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_031049 |
|---|
| Protein GI | 49187796 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAT TTTCTTTTAC AAAAATGCAT GGTCTTGGCA ATAGTTATAT ATATGTAAAT
ATGTTTGAAG AACAAATTCC TGAAGAAGAT TTAGCTCTTG TGGCGGAAAA GGTTTCAAAT
ATTAATACTG GTATTGGAGC CGATGGAATG ATTTTAATTT GTCCATCTGA CGTAGCACCT
GTGAAAATGC GCATGTTTAA TAATGATGGA TCAGAAGGAA AGAGCTGTGG TAACGGTCTA
CGCTGCGTAG CGAAATATGC GTATGAGCAT AAACTAGTAG AAGATACAGT TTTCACAATT
GAAACGTTAG CTGGCATTGT AACGGCGGAA GTAACGGTAG AAGAAGGGAA AGTTACGTTA
GCGAAAATCG ATATGGGAGC ACCTCGTTTA ACACGTGCAG AAATACCGAT GCTTGGTGAA
GGTGAAACAC CATTTATTCG TGAAAACTTC TTATACAATA ATCATCGTTA TGCATTTACA
GCTGTTTCAA TGGGAAATCC GCATGCGGTT ATTTTTGTGG ATGATGTAGA ACAAGCACCT
CTTACAACAC TTGGACCAGT TCTTGAGACA CATGAAATGT TCCCAGAACG AGTAAATGTT
GAATTCATTG AGATTTTGAA TGAGGAAGAG ATGAACTTCC GCGTTTGGGA ACGTGGATCT
GGCGTAACAC AAGCTTGCGG AACAGGGGCG TGTGCTGCAG TTGTAGCCTC TATTTTAAAT
GGAAAGATGG AACGTGGTAA GGAAATTACA GTTCATTTAG CTGGTGGCGA TTTAATGATT
GCATGGACAG AAGAAGGCAA CGTGTTAATG AAAGGACCAG CAGAAGTAAT TTGCCGCGGA
GTGTATGAGT ACAAGATAGA AGCGTAA
|
|---|
| Protein sequence | MSQFSFTKMH GLGNSYIYVN MFEEQIPEED LALVAEKVSN INTGIGADGM ILICPSDVAP
VKMRMFNNDG SEGKSCGNGL RCVAKYAYEH KLVEDTVFTI ETLAGIVTAE VTVEEGKVTL
AKIDMGAPRL TRAEIPMLGE GETPFIRENF LYNNHRYAFT AVSMGNPHAV IFVDDVEQAP
LTTLGPVLET HEMFPERVNV EFIEILNEEE MNFRVWERGS GVTQACGTGA CAAVVASILN
GKMERGKEIT VHLAGGDLMI AWTEEGNVLM KGPAEVICRG VYEYKIEA
|
|---|
| |