| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_1286 |
|---|
| Symbol | ccmC |
|---|
| ID | 4684325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 1331364 |
|---|
| End bp | 1332143 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639842445 |
|---|
| Product | heme exporter protein CcmC |
|---|
| Protein accession | YP_989535 |
|---|
| Protein GI | 121602712 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT TATCGCACAA TAAAAACACG AAATTGGCCT TCGCAAATTC AACCCGTTTC
ATGCAGGTCA GCAGCACTAT TTTGCCTTGG TTAGCTAGTA TCACAGTGTT TTTGCTTATT
CTAGGTCTAA CTTTGGTTAT ACATTCTCCT CATGATTATC AACAGGGAAT TACTGTCAGA
ATTATGTATA TTCACGCACC ATTTGCGTGG TTATCTACAC TCTGTTACAT CATGATGAGC
GCCGCCGCAC TCAGCAGCTT AGTTTGGGGT CATCACCTTG CTAGTATAGC CCTTAAATGT
GCTGCACCTA TTGGAACAAT CTTTACAGCC TTGGCTTTAA TGACAGGAGC TCTTTGGGGG
CGTCCCACAT GGGGAACATG GTGGGTATGG GATGCTAGAC TGACATCAGT TTTGATCCTA
TTTTTTATCT ACCTCGCTAT TGTCATGCTC TCTCGCGCTT TTCATAACCA GGTCAAAGCT
GCATATGCTA TAGCAATTCT GACACTCGTC GGATCAGTCA ATATCCCCAT TATCAAATTT
TCTGTCAGTT GGTGGAATAC ACTCCATCAA CCGGCATCAC TATTACGCGC AGGTGGCACA
ACAATTGACA GCACCATGTT ATGGCCATTG ATAACAATGA CTCTTTGTTT TACTTTTCTG
TTCATCATAT TGCATTTACT GGCTATGCAA AATGAAATCA CTTACCGTTA TATACAAACA
CTTCAAAATA AAGCAGCCGA CCGCACTCAG AACCAGGACT CTTCGTTATG CTCGACCTAA
|
|---|
| Protein sequence | MDKLSHNKNT KLAFANSTRF MQVSSTILPW LASITVFLLI LGLTLVIHSP HDYQQGITVR
IMYIHAPFAW LSTLCYIMMS AAALSSLVWG HHLASIALKC AAPIGTIFTA LALMTGALWG
RPTWGTWWVW DARLTSVLIL FFIYLAIVML SRAFHNQVKA AYAIAILTLV GSVNIPIIKF
SVSWWNTLHQ PASLLRAGGT TIDSTMLWPL ITMTLCFTFL FIILHLLAMQ NEITYRYIQT
LQNKAADRTQ NQDSSLCST
|
|---|
| |