Gene BARBAKC583_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_1124 
Symbol 
ID4685003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp1161608 
End bp1162180 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content39% 
IMG OID639842294 
Producttransglycosylase 
Protein accessionYP_989385 
Protein GI121602493 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCATTC GCGCAATTCC CATCGGTTGG TTGTATAGTT TTACTATATT AAGCAGTGCT 
GCTGCTGGCA ATGTATGTGA AGCAGAAATG ATGAATGCTT CTAAGCGTTA TCATATCCCT
TTGGGTATTC TTTATGCCGT TGGATTAACA GAAACAGGCC ATAAGGAATC ATTGCAACCT
CATGCACTGA ATATTAATGG TAAGGCTGTT TTTGCGAAAA CGAAGACAGA AGCTGTTCGT
CTCTTTAAAG ACGCAAAAAG CCGTGGTGTA AAATTAATTG ATGTTGGGTG TATGCAGATC
AATGATTATT ATCACGGGTC ACATTTTGCT TCTATAGAAG AGATGCTACA GCCTCGCAAA
AACGTGGATT ATGCAGCGCG TTTTTTACAA ATTTTGCATC AAAAAGAAGG CAACTGGACT
ATGGCAGTTG CACGTTATCA TGCCGGACCC AATAACAATC CAGCTCAAAA GCGCTATGTC
TGCCGTGTTA TAAGTAATAT GGTTGCAAGT GGTTTTGGTA AATGGACTTC TAATTCTAAG
ATCTTTTGTA AAGACTCATC GAAAAAACAC TAA
 
Protein sequence
MFIRAIPIGW LYSFTILSSA AAGNVCEAEM MNASKRYHIP LGILYAVGLT ETGHKESLQP 
HALNINGKAV FAKTKTEAVR LFKDAKSRGV KLIDVGCMQI NDYYHGSHFA SIEEMLQPRK
NVDYAARFLQ ILHQKEGNWT MAVARYHAGP NNNPAQKRYV CRVISNMVAS GFGKWTSNSK
IFCKDSSKKH