| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0904 |
|---|
| Symbol | |
|---|
| ID | 4684106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | - |
|---|
| Start bp | 932336 |
|---|
| End bp | 933100 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639842087 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase family protein |
|---|
| Protein accession | YP_989189 |
|---|
| Protein GI | 121602034 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 0.814547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAA TTGATTATAA TAGCTATCGC TCTGTAAAAA GCTTTAATCG TCGGGTTCGT
TTTTTAGTAT TACATTATAC TGCAATTGAC TTTGAAGTGT CCATTGCAGC TTTGACAGGA
GCTAAGGTTA GTGCTCACTA TCTTATTCCG GATCCCTCAG AAAAAACGTA TATTGAAGCA
GGTTTTAAAG ATATGCGTAT TTTTAATTTA GTTGATGAAA ATGAACGTGC GTGGCATGCT
GGTGTTAGTT CATGGGCTGG GCGTACAAAT TTGAATGATA CGTCTATTGG GATTGAGATA
GTTAATTTAG CCACTGGTGA TCCTGGAGGA TTCCCTCCTT ATAATCCAAT ACAAATTGAT
GCAGTTAAAG AACTTGGGGC GAATATTTTG CAACGTTATC CAGATATTGT GCCGACTAAT
GTTGTCGCCC ATAGTGATAT TGCTCCTACA CGGAAAAGTG ATCCAGGTCC ATCTTTTCCC
TGGAAAGAGC TCTATAGAGT AGGTATTGGA GCATGGTATG ATGATGATCT TAAGGAGGAA
TATCAAGCTA AATTTCTCAA AAATATTCCA TCTCAATCAG AGATTGTTGC TCAACTAAGG
AAATATGGAT ATGATACCTC AATTGCAAAT ACTGAAAGTG GATATGAGGC TTTGATTCGA
GCATTTCAGA TGCATTTTCG CCAAGAAACG TATGATGGAA TTCTAGATGC TGAAACAGCA
GCAATTCTTT ATGCATTAGT AGCAAAATAT TTTCCATCGC AGTAA
|
|---|
| Protein sequence | MYKIDYNSYR SVKSFNRRVR FLVLHYTAID FEVSIAALTG AKVSAHYLIP DPSEKTYIEA
GFKDMRIFNL VDENERAWHA GVSSWAGRTN LNDTSIGIEI VNLATGDPGG FPPYNPIQID
AVKELGANIL QRYPDIVPTN VVAHSDIAPT RKSDPGPSFP WKELYRVGIG AWYDDDLKEE
YQAKFLKNIP SQSEIVAQLR KYGYDTSIAN TESGYEALIR AFQMHFRQET YDGILDAETA
AILYALVAKY FPSQ
|
|---|
| |