| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0520 |
|---|
| Symbol | pcm |
|---|
| ID | 4684242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 529763 |
|---|
| End bp | 530422 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639841711 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_988835 |
|---|
| Protein GI | 121602614 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 0.25882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGA AGGATATTTT ACAATTTCGT GAGAAATTAG CAAGCCTTGT GCTGAAAATG
CGTAGTAAGG GAATTGATGA TGTAAATTTT TTTGCAGCAT TTGAGAAAAT TCCACGTCAA
TATTTTGTTT CTTCCCCTTG GCTTAATAGT GCTTATGATA ATAAAGTTAT TCCAATTGAA
TGCGGTGAAT ATATTGAGCG TTTGGAGGAG CAGCTTCTGA TTCTCTTTGC GTTGTCATTG
AGAAAAAAGC ACCGTGTTTT AGAAATTGGT ACAGGCTCTG GTTTTTGTTC TGCTCTTATC
GCATATTTAA GTGATCGTGT AGTAACAGTT GATCGTTATA AAACACTTGT TGATCTAGCA
CGACAAAAAT TTCAAACTTT AGGAATTGAA AATATTGTTG TGCATCAAAT TGATGGTAGT
CGAGGTGTTA CAGGTTTTGG GCTATTTGAC CGTATTCTTA TTTGGCCATC ACGCTCTGAT
GAACCAGAAG AGTTTTTAGA GCTTTTAACT GGAAATGGTA TTCTTATTCA AGCTATTGGA
CCAGATGAAG GAGTGCAGAT GGTTACACGT TATATAAAAA ATGGTAGCCG ATTTAAGCGC
TTAGAAATGT TTCAAGCGCG CTATCAACCT TTTATTAAAA ATGTTGCGGC AGTTCTCTAA
|
|---|
| Protein sequence | MEQKDILQFR EKLASLVLKM RSKGIDDVNF FAAFEKIPRQ YFVSSPWLNS AYDNKVIPIE
CGEYIERLEE QLLILFALSL RKKHRVLEIG TGSGFCSALI AYLSDRVVTV DRYKTLVDLA
RQKFQTLGIE NIVVHQIDGS RGVTGFGLFD RILIWPSRSD EPEEFLELLT GNGILIQAIG
PDEGVQMVTR YIKNGSRFKR LEMFQARYQP FIKNVAAVL
|
|---|
| |