Gene BARBAKC583_0446 details

Gene Information

• Locus tag: BARBAKC583_0446
• Symbol: thiC
• ID: 4684433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: -
• Start bp: 450479
• End bp: 452314
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639841639
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_988764
• Protein GI: 121602460
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0422] Thiamine biosynthesis protein ThiC
• TIGRFAM ID: [TIGR00190] thiamine biosynthesis protein ThiC

Plasmid Coverage information

• Num covering plasmid clones: 61
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAAAAAC ATACTCCATC AGTTAGTTGT AGCCCTTTTC CTTCTTCGCA CAAATTTTAT 
CAACAAAGCC TTCTCTTTCC TAACGTGCGC GTGCCATTAC GTAAAATTTT ATTGACAGAT 
GGCAGCGGCG AGAGTCCTTT CAACGTCTAT GACACTTCAG GTCCTTACAC CGATGAAAAT 
GTGATCATTG ATATCACGAA AGGATTGCCT GCAATCAGGA TACCTTGGCT ATCTGAGCGT 
GCTGATACTG AATCTTACCC TGCTCGATTA GTTAAACCTG AAGATAATGG CTTTACCCAT 
GGTAAAGACC TGACACCAGT CTTTGAAAAA AAACGACCTA TTTTGCGTTC AAAAAATGGT 
AAATCCATTA CACAGATGAC CTATGCACGG GCAGGTATTA TCACTGCAGA AATGGAATAT 
GTTGCAATAC GTGAAAATGA AGGTCTGATA GAAAAAAACA AACAGCACAC GACATCAAGT 
AAAGCATTTG ATGCATCAAT ACCGGAAGTC TATACAGCAG AATTTGTTCG CAATGAAATT 
GCCTGCGGGC GAGCCATTAT CCCGCAGAAT ATCAATCATC CAGAATGCGA ACCCATGATT 
ATTGGGCGTA ACTTTCGTGT TAAAATTAAT GCTAATATTG GAAATTCAGC AGTCACTTCA 
TCCATGGCAG AAGAAGTAGA AAAAATGGTT TGGGCTATTC GCTGGGGAGC CGATACCGTT 
ATGGATCTTT CAACGGGCCG TAATATTCAT AATATTCGTG AGTGGATTAT TCGAAACTCT 
CCAGTTCCTA TAGGAACTGT TCCAATTTAT CAAGCACTTG AAAAAGTACA TGGTATTGCT 
GAAAACCTAA CATGGGATAT CTTTCGCGAT ACTCTTATTG AACAAGCAGA ACAGGGCGTC 
GATTATTTCA CTATTCATGC AGGATTAAAA TTAGCTTTCA TTCCTCTAAC TATTGATCGC 
ACAACAGGTA TTGTTTCGCG AGGTGGTTCA ATTATAGCCA AATGGTGCTT GCATCACCAC 
AAAGAGAATT TTCTCTATGA GCATTTTGAT GAAATTTGTG ATATTGCACA CACATATGAT 
GTATCTCTTT CATTAGGTGA TGGATTGCGT CCTGGATCTA TTGCTGATGC AAATGATGAA 
GCTCAATTTG CGGAGCTCAA AACTTTAGGT GAACTAACCC AAATTGCATG GGAAAAAAAT 
GTACAGACCA TGATTGAAGG ACCTGGTCAT GTTCCAATGC ATAAAATTAA AGAAAATATG 
GATCAACAAT TAGCTCTCTG TAATGAGGCA CCCTTCTATA CTTTAGGCCC CCTTACAACT 
GATATTGCAC CTGGATATGA CCATATCACA TCAGCCATTG GTGCGGCCAT GATTGGTTGG 
TTTGGAACAG CAATGCTCTG TTATGTAACA CCTAAAGAAC ACTTAGGTCT ACCAGACAAA 
AATGATGTCA AAACTGGTGT CATCACTTAT AAAATTGCTG CCCACGCTGC TGACCTTGCC 
AAAGGCCTAC CCAGAGCACA ATTGCGCGAT AACACTCTTT CACGCGCACG ATTTGATTTT 
CGATGGCATG ATCAATTCAA CCTTTCTCTT GATCCAGATA CAGCCCGCGC CTTTCATGAT 
GAGACAATGC CTAAAGAAGC TCATAAATTA GCGCATTTTT GTTCTATGTG TGGGCCTAAA 
TTTTGCTCAA TGCGTATTTC CCACGATATC CGTGATGCAG TGGCAATAAA AAAAACAAGA 
GACGAAGGCA TGGCTGCTAT GGCCGAAAAG TATCAACAAA ATGGTGATCT CTATATGAAA 
GTCATGCCTT CTATAAAAGA AACAGTAGAC GATTGA 

 

Protein sequence

MQKHTPSVSC SPFPSSHKFY QQSLLFPNVR VPLRKILLTD GSGESPFNVY DTSGPYTDEN 
VIIDITKGLP AIRIPWLSER ADTESYPARL VKPEDNGFTH GKDLTPVFEK KRPILRSKNG 
KSITQMTYAR AGIITAEMEY VAIRENEGLI EKNKQHTTSS KAFDASIPEV YTAEFVRNEI 
ACGRAIIPQN INHPECEPMI IGRNFRVKIN ANIGNSAVTS SMAEEVEKMV WAIRWGADTV 
MDLSTGRNIH NIREWIIRNS PVPIGTVPIY QALEKVHGIA ENLTWDIFRD TLIEQAEQGV 
DYFTIHAGLK LAFIPLTIDR TTGIVSRGGS IIAKWCLHHH KENFLYEHFD EICDIAHTYD 
VSLSLGDGLR PGSIADANDE AQFAELKTLG ELTQIAWEKN VQTMIEGPGH VPMHKIKENM 
DQQLALCNEA PFYTLGPLTT DIAPGYDHIT SAIGAAMIGW FGTAMLCYVT PKEHLGLPDK 
NDVKTGVITY KIAAHAADLA KGLPRAQLRD NTLSRARFDF RWHDQFNLSL DPDTARAFHD 
ETMPKEAHKL AHFCSMCGPK FCSMRISHDI RDAVAIKKTR DEGMAAMAEK YQQNGDLYMK 
VMPSIKETVD D