Gene BARBAKC583_0400 details

Gene Information

• Locus tag: BARBAKC583_0400
• Symbol: dxs
• ID: 4683822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 398917
• End bp: 400833
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 639841593
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_988719
• Protein GI: 121602344
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTCGGC CATTAACGCC ATTGCTTGAT TGTGTTCTTT CACCATTAGA TTTGCGGGCA 
TTGCCTGCGT CTGATTTAGC GCGATTAGCT GATGAGCTAC GGGCCGAAAT GATTGATGTG 
GTTTCTGTAA CAGGTGGTCA TCTTGGTGCG GGACTAGGTG TTGTCGAGCT CACTATTGCG 
TTGCATTATA TTTTTAATAC ACCTGATGAT AGAATTATCT GGGATGTTGG TCATCAAGCT 
TATCCTCACA AAATTTTGAC TGGCCGCAGA GATAAAATTC GCACACTACG CCAAGAGGGA 
GGATTATCAG GTTTTACTAA GCGCTCAGAG AGCATATATG ATCCATTTGG TGCAGGTCAT 
TCTTCTACTT CTATTTCAGC TGGTCTTGGT ATGGCAATGG CTAGCGCGTT GAAAGCAGAA 
GAGAGACGTA ACGTTATTGC TGTCATTGGT GATGGTGCTA TGTCTGCGGG GATGGCTTAT 
GAAGCAATGA ACAATGCAGG GGCTTTGGAT GCACGCTTAA TTGTTATCCT TAATGATAAT 
GATATGTCTA TTGCTCCTCC CACTGGTGCG ATGAGTGCTC ATCTTGCACG GCTAGTTTCT 
CGTCCATCTT ATCGTCATTT GCGCGAACGG ATAAAGCTAT TTAGCAAGAA ATTTCCAAAA 
TTCTTTTCAG AGCAAGCAAG TCGTTCAGAA GAATTTGCAC GTGGTTTTTT AGTTGGGGGC 
ACTTTATTTG ATGAGCTTGG CTTTTATTAT GTTGGACCGA TAGATGGTCA TAACTTTGAG 
CATTTGCTTC CTGTTTTGAA AAATGTTCGT GCATATCCTA ATGGCCCTGT TTTGGTCCAT 
GTGGTAACAC ATAAGGGGAA GGGGTATGCC CCTGCAGAGG AATCAGCTGA TAAATATCAT 
GGCGTTAATC GTTTTGATGT TGTCACAGGA AAACAGGTTA AAGCACAAAG CACTCGTCTT 
TCTTATACAA AAGTGTTTTC TAAAGCTTTA ATAGAAGAAG CTACTCATGA TCATAAAATT 
GTTGCTATAA CGGCAGCAAT GCCAACAGGA ACGGGTCTTG ATTCTTTTGC TGAAAAATTT 
TCTGATAGAA TGTTTGACGT TGGGATTGCT GAGCAGCATG CTGTGACTTT CGCTGCAGGT 
ATTGCGTGTG AAGGGTATAA ACCCTTTGTT GCGATTTATT CTACTTTTTT ACAGCGTGCT 
TATGATCAGA TTATTCATGA TGTGTCGATT CAGAAATTAC CAGTGCGTTT TGCAATTGAC 
CGAGCAGGTT TTGTTGGTGC AGATGGTGCA ACGCATGCTG GGAGTTTTGA TATTGTTTTT 
CTAGCAACAC TACCTGAATT TGTCGTGATG GCTCCTTCTG ATGAAGTTGA GCTTATGCAT 
ATGGTGCGCA CGGCAGCAGT CTATGATCAA GGGCCTATTT CTTTTCGCTA TCCACGTGGT 
GAAGGTATAG GGATGGATTT GCCGCAAAGA GGTGAGGTGC TTGAAATTGG TAAAGGGCGC 
GTTTTGCGTG AAGGGAGCAG AGTCGCTCTG GTTTGTTTTG GAACGCAGTT GTCTGAAGTA 
TTGGTTGCAG CTGATGAATT GGCAGCAGAG GGGATCTCTA CAACTGTTGC TGATGCAAGG 
TTTGCAAAAC CTTTAGATAA GGATTTAATG CGTCGTTTGG CACGTGAGCA TGAAGTGTTC 
ATAACAATTG AAGAAGGAGC AATAGGGGGG TTTGGTGCGC ATGTATTACA ATTTTTAGCA 
CAAGAAGCAT TATTAGAACA CGGTTTAAAA GTCCGCACAT TAAGACTTCC TGACGAGTAT 
TTAAATCATG GTTCGCCAGA GAAAATTCTT TCGCGTGTCG GACTTGATGC AAAGGGTATC 
ATCAATGCTG TTTTTACTTC TTTAGGATAT GAGACGCGGA AAACGCTGCA AATTTAA 

 

Protein sequence

MSRPLTPLLD CVLSPLDLRA LPASDLARLA DELRAEMIDV VSVTGGHLGA GLGVVELTIA 
LHYIFNTPDD RIIWDVGHQA YPHKILTGRR DKIRTLRQEG GLSGFTKRSE SIYDPFGAGH 
SSTSISAGLG MAMASALKAE ERRNVIAVIG DGAMSAGMAY EAMNNAGALD ARLIVILNDN 
DMSIAPPTGA MSAHLARLVS RPSYRHLRER IKLFSKKFPK FFSEQASRSE EFARGFLVGG 
TLFDELGFYY VGPIDGHNFE HLLPVLKNVR AYPNGPVLVH VVTHKGKGYA PAEESADKYH 
GVNRFDVVTG KQVKAQSTRL SYTKVFSKAL IEEATHDHKI VAITAAMPTG TGLDSFAEKF 
SDRMFDVGIA EQHAVTFAAG IACEGYKPFV AIYSTFLQRA YDQIIHDVSI QKLPVRFAID 
RAGFVGADGA THAGSFDIVF LATLPEFVVM APSDEVELMH MVRTAAVYDQ GPISFRYPRG 
EGIGMDLPQR GEVLEIGKGR VLREGSRVAL VCFGTQLSEV LVAADELAAE GISTTVADAR 
FAKPLDKDLM RRLAREHEVF ITIEEGAIGG FGAHVLQFLA QEALLEHGLK VRTLRLPDEY 
LNHGSPEKIL SRVGLDAKGI INAVFTSLGY ETRKTLQI