| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_04226 |
|---|
| Symbol | deoD |
|---|
| ID | 8114502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 4537370 |
|---|
| End bp | 4538089 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644850364 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001937 |
|---|
| Protein GI | 251787633 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0813] Purine-nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCC CACACATTAA TGCAGAAATG GGCGATTTCG CTGACGTAGT TTTGATGCCA
GGCGACCCGC TGCGTGCGAA GTATATTGCT GAAACTTTCC TTGAAGATGC CCGTGAAGTG
AACAACGTTC GCGGTATGCT GGGCTTCACC GGTACTTACA AAGGCCGCAA AATTTCCGTA
ATGGGTCACG GTATGGGTAT CCCGTCCTGC TCCATCTACA CCAAAGAACT GATCACCGAT
TTCGGCGTGA AGAAAATTAT CCGCGTGGGT TCCTGTGGCG CAGTTCTGCC GCACGTAAAA
CTGCGCGACG TCGTTATCGG TATGGGTGCC TGCACCGATT CCAAAGTTAA CCGTATCCGT
TTTAAAGACC ATGACTTTGC CGCTATCGCT GACTTTGACA TGGTGCGTAA CGCGGTAGAC
GCGGCTAAAG CACTGGGTGT TGATGCTCGC GTGGGTAACC TGTTCTCCGC TGACCTGTTC
TACTCTCCGG ACGGCGAAAT GTTCGACGTG ATGGAAAAAT ACGGCATCCT CGGCGTGGAA
ATGGAAGCGG CTGGTATCTA CGGCGTCGCT GCAGAGTTTG GCGCGAAAGC CCTGACCATC
TGCACCGTGT CTGACCACAT CCGCACTCAC GAGCAGACCA CTGCCGCTGA GCGTCAGACC
ACCTTCAACG ACATGATCAA AATCGCACTG GAATCCGTTC TGCTGGGCGA TAAAGAGTAA
|
|---|
| Protein sequence | MATPHINAEM GDFADVVLMP GDPLRAKYIA ETFLEDAREV NNVRGMLGFT GTYKGRKISV
MGHGMGIPSC SIYTKELITD FGVKKIIRVG SCGAVLPHVK LRDVVIGMGA CTDSKVNRIR
FKDHDFAAIA DFDMVRNAVD AAKALGVDAR VGNLFSADLF YSPDGEMFDV MEKYGILGVE
MEAAGIYGVA AEFGAKALTI CTVSDHIRTH EQTTAAERQT TFNDMIKIAL ESVLLGDKE
|
|---|
| |