Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03429 |
Symbol | rfaC |
ID | 8115640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 3662034 |
End bp | 3662933 |
Gene Length | 900 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644849602 |
Product | hypothetical protein |
Protein accession | YP_003001175 |
Protein GI | 251786871 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00616403 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGTTT TGATCGTTAA AACATCGTCG ATGGGCGATG TTCTCCATAC GTTGCCCGCA CTCACTGATG CCCAGCAGGC AATCCCAGGG ATTAAGTTTG ACTGGGTGGT GGAAGAAGGG TTCGCACAGA TTCCTTCCTG GCACGCTGCC GTTGAGCGAG TTATTCCTGT GGCAATACGT CGCTGGCGTA AAGCCTGGTT CTCGGCCCCC ATAAAAGTTG AACGCAAAGC GTTTCGTGAA GCGCTACAAG CAGAGAACTA TGACGCAGTT ATCGATGCTC AGGGGCTGGT AAAAAGCGCG GCGCTGGTGA CGCGTCTGGC GCATGGCGTA AAGCATGGAT TGGACTGGCA AACCGCTCGC GAACCGTTAG CCAGCCTGTT TTACAATCGT AAGCATCATA TTGCAAAACA GCAGCACGCC GTAGAACGCA CCCGCGAACT GTTTGCCAAA AGTCTGGGCT ATAGCAAACC GCAAACCCAG GGCGATTATG CTATTGCACA GCATTTCCTG ACGAACCTGC CTACAGATGC TGGCGAATAT GCCGTATTTC TTCATGCGAC GACCCGTGAT GATAAACACT GGCCGGAAGA ACACTGGCGA GAATTGATTG GTTTACTGGC TGCTTCAGGA ATACGGATTA AACTTCCGTG GGGCGCGCCG CATGAGGAAG AACGGGCGAA ACGACTGGCG GAAGGATTTG CTTATGTTGA AGTATTGCCG AAGATGAGTC TGGAAGGCGT TGCCCGCGTG CTGGCCGGGG CTAAATTTGT AGTGTCAGTG GATACGGGGT TAAGCCATTT AACGGCGGCA CTGGATAGAC CCAATATCAC GGTTTATGGA CCAACCGATC CGGGATTAAT TGGTGGGTAT GGGAAGAATC AGATGGTTTG TAGGGCTCCG
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Protein sequence | MRVLIVKTSS MGDVLHTLPA LTDAQQAIPG IKFDWVVEEG FAQIPSWHAA VERVIPVAIR RWRKAWFSAP IKVERKAFRE ALQAENYDAV IDAQGLVKSA ALVTRLAHGV KHGLDWQTAR EPLASLFYNR KHHIAKQQHA VERTRELFAK SLGYSKPQTQ GDYAIAQHFL TNLPTDAGEY AVFLHATTRD DKHWPEEHWR ELIGLLAASG IRIKLPWGAP HEEERAKRLA EGFAYVEVLP KMSLEGVARV LAGAKFVVSV DTGLSHLTAA LDRPNITVYG PTDPGLIGGY GKNQMVCRAP
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