Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03075 |
Symbol | acrF |
ID | 8115329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | + |
Start bp | 3275399 |
End bp | 3278503 |
Gene Length | 3105 bp |
Protein Length | 1034 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644849258 |
Product | hypothetical protein |
Protein accession | YP_003000831 |
Protein GI | 251786527 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACT TTTTTATTCG ACGACCGATA TTTGCATGGG TGCTGGCCAT TATTCTGATG ATGGCGGGCG CACTGGCGAT CCTACAATTG CCCGTCGCTC AGTATCCAAC CATTGCACCG CCTGCGGTTT CTGTTTCGGC AAACTATCCA GGTGCTGATG CGCAGACCGT GCAGGATACG GTGACGCAGG TTATCGAACA GAATATGAAT GGTATCGATA ACCTGATGTA TATGTCCTCC ACCAGCGATT CCGCCGGTAG CGTGACAATT ACCCTTACCT TCCAGTCCGG GACCGATCCT GATATCGCGC AAGTGCAGGT GCAGAACAAA CTCCAGCTCG CCACGCCGTT GCTGCCGCAG GAAGTTCAGC AGCAGGGGAT CAGTGTTGAA AAGTCCAGTA GCAGCTATTT GATGGTGGCG GGCTTTGTCT CTGATAACCC AGACATCACA CAGGACGATA TCTCGGACTA TGTGGCTTCT AACGTTAAAG ATACGCTTAG CCGTCTGAAT GGCGTCGGTG ACGTACAGCT TTTCGGCGCA CAGTATGCGA TGCGTATCTG GCTGGACGCC GATCTGCTAA ACAAATATAA ACTGACACCG GTTGATGTGA TTAACCAGTT GAAGGTACAG AACGATCAGA TCGCTGCCGG ACAGTTGGGC GGAACGCCAG CGTTACCAGG GCAACAGTTG AATGCCTCGA TTATTGCTCA GACGCGGTTA AAAAATCCGG AAGAATTCGG CAAAGTGACC CTGCGCGTAA ACAGTGACGG CTCGGTGGTG CGTCTGAAAG ATGTCGCACG GGTTGAACTT GGCGGTGAAA ACTATAACGT TATCGCTCGC ATCAACGGAA AACCGGCGGC GGGCCTGGGG ATTAAGCTGG CAACCGGCGC GAATGCTCTC GATACCGCGA AAGCCATTAA GGCAAAACTG GCGGAATTAC AGCCATTCTT CCCGCAGGGA ATGAAGGTTC TCTACCCTTA TGACACCACG CCATTCGTCC AGCTTTCTAT TCACGAAGTG GTAAAAACGC TGTTCGAAGC CATTATGCTG GTGTTCCTGG TGATGTATCT GTTCTTGCAG AATATGCGAG CAACGCTGAT CCCCACCATT GCGGTACCCG TGGTGTTGTT AGGGACGTTT GCCATCCTCG CCGCTTTTGG TTACTCCATC AACACACTAA CGATGTTCGG GATGGTGCTT GCCATCGGGC TGCTCGTCGA TGATGCGATA GTGGTGGTGG AGAACGTCGA GCGCGTGATG ATGGAGGATA AGCTCCCGCC AAAAGAAGCG ACGGAAAAAT CAATGTCGCA AATTCAGGGC GCACTGGTGG GTATCGCGAT GGTGCTGTCA GCGGTATTTA TTCCGATGGC ATTCTTCGGC GGTTCTACTG GGGCAATTTA TCGCCAGTTC TCTATCACCA TCGTTTCGGC AATGGCGCTT TCTGTTCTGG TGGCATTGAT TCTTACCCCT GCGTTATGTG CAACGCTGCT TAAACCCGTC TCTGCTGAGC ATCACGAAAA TAAGGGCGGT TTCTTCGGCT GGTTTAATAC CACCTTCGAT CATAGCGTTA ACCACTACAC CAACAGCGTC GGCAAAATCC TCGGTTCCAC AGGACGATAT TTACTGATCT ATGCGCTGAT TGTTGCAGGA ATGGTGGTGT TGTTTTTACG TCTTCCGTCT TCCTTCTTAC CTGAAGAGGA TCAGGGTGTC TTTCTGACCA TGATTCAGTT ACCCGCTGGC GCGACGCAAG AGCGGACGCA AAAAGTGTTG GATCAAGTGA CGGATTACTA TCTGAAAAAC GAGAAAGCGA ACGTTGAAAG TGTCTTTACG GTTAACGGCT TTAGCTTCAG CGGCCAGGCA CAAAACGCCG GTATGGCCTT CGTCAGTCTG AAACCGTGGG AAGAGCGTAA TGGTGATGAA AACAGTGCGG AAGCGGTAAT CCATCGTGCC AAAATGGAAT TGGGCAAGAT CCGCGACGGT TTTGTCATTC CATTCAATAT GCCAGCCATT GTTGAACTGG GCACGGCAAC GGGTTTCGAC TTTGAGTTAA TTGATCAGGC TGGGCTGGGT CACGATGCCC TAACCCAGGC CCGTAACCAG TTGCTTGGTA TGGCTGCGCA ACATCCTGCC AGCTTAGTCA GCGTGCGTCC TAATGGCCTG GAAGACACCG CGCAGTTTAA ACTGGAAGTT GACCAGGAAA AGGCGCAGGC ATTAGGTGTT TCACTTTCTG ACATCAATCA GACCATTTCA ACGGCGCTGG GTGGGACTTA CGTTAACGAC TTCATCGACC GTGGTCGTGT GAAAAAGGTG TATGTTCAGG CGGATGCCAA ATTCCGTATG CTGCCAGAAG ATGTCGATAA ACTTTATGTC CGCAGCGCCA ACGGCGAAAT GGTGCCATTC TCTGCCTTTA CCACTTCACA TTGGGTGTAT GGCTCTCCGC GACTGGAACG CTACAACGGT CTGCCGTCAA TGGAGATTCA GGGGGAAGCC GCGCCAGGAA CCAGTTCCGG CGATGCCATG GCGTTGATGG AAAACCTTGC GTCAAAATTA CCTGCGGGCA TTGGTTATGA CTGGACGGGT ATGTCGTATC AGGAACGCTT ATCGGGAAAC CAGGCTCCCG CTCTGGTAGC AATTTCCTTT GTGGTTGTTT TCCTGTGCCT TGCTGCACTC TATGAAAGCT GGTCAATTCC TGTCTCGGTT ATGTTGGTCG TGCCGTTAGG GATTGTCGGC GTGCTGCTGG CGGCGACACT CTTTAATCAA AAAAATGACG TCTACTTTAT GGTGGGCTTG CTAACGACAA TTGGCTTGTC GGCCAAAAAC GCTATTTTGA TTGTTGAGTT CGCTAAAGAT CTCATGGAGA AAGAGGGTAA AGGTGTTGTT GAAGCGACAC TGATGGCAGT ACGTATGCAT CTGCGTCCTA TCCTGATGAC CTCTCTCGCC TTTATTCTCG GCGTATTACC GCTAGCTATC AGTAACGGTG CCGGCAGTGG CGCGCAGAAC GCAGTGGGTA TCGGGGTAAT GGGAGGAATG GTCTCTGCAA CGTTGCTGGC AATCTTCTTC GTACCGGTGT TCTTTGTGGT GATCCGCCGT TGCTTTAAAG GATAA
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Protein sequence | MANFFIRRPI FAWVLAIILM MAGALAILQL PVAQYPTIAP PAVSVSANYP GADAQTVQDT VTQVIEQNMN GIDNLMYMSS TSDSAGSVTI TLTFQSGTDP DIAQVQVQNK LQLATPLLPQ EVQQQGISVE KSSSSYLMVA GFVSDNPDIT QDDISDYVAS NVKDTLSRLN GVGDVQLFGA QYAMRIWLDA DLLNKYKLTP VDVINQLKVQ NDQIAAGQLG GTPALPGQQL NASIIAQTRL KNPEEFGKVT LRVNSDGSVV RLKDVARVEL GGENYNVIAR INGKPAAGLG IKLATGANAL DTAKAIKAKL AELQPFFPQG MKVLYPYDTT PFVQLSIHEV VKTLFEAIML VFLVMYLFLQ NMRATLIPTI AVPVVLLGTF AILAAFGYSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM MEDKLPPKEA TEKSMSQIQG ALVGIAMVLS AVFIPMAFFG GSTGAIYRQF SITIVSAMAL SVLVALILTP ALCATLLKPV SAEHHENKGG FFGWFNTTFD HSVNHYTNSV GKILGSTGRY LLIYALIVAG MVVLFLRLPS SFLPEEDQGV FLTMIQLPAG ATQERTQKVL DQVTDYYLKN EKANVESVFT VNGFSFSGQA QNAGMAFVSL KPWEERNGDE NSAEAVIHRA KMELGKIRDG FVIPFNMPAI VELGTATGFD FELIDQAGLG HDALTQARNQ LLGMAAQHPA SLVSVRPNGL EDTAQFKLEV DQEKAQALGV SLSDINQTIS TALGGTYVND FIDRGRVKKV YVQADAKFRM LPEDVDKLYV RSANGEMVPF SAFTTSHWVY GSPRLERYNG LPSMEIQGEA APGTSSGDAM ALMENLASKL PAGIGYDWTG MSYQERLSGN QAPALVAISF VVVFLCLAAL YESWSIPVSV MLVVPLGIVG VLLAATLFNQ KNDVYFMVGL LTTIGLSAKN AILIVEFAKD LMEKEGKGVV EATLMAVRMH LRPILMTSLA FILGVLPLAI SNGAGSGAQN AVGIGVMGGM VSATLLAIFF VPVFFVVIRR CFKG
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