| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01935 |
|---|
| Symbol | rfbD |
|---|
| ID | 8115645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 2009424 |
|---|
| End bp | 2010323 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644848150 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002999723 |
|---|
| Protein GI | 251785419 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC TCCTATTCGG CAAAACAGGG CAGGTAGGTT GGGAACTGCA GCGTGCTCTG
GCACCGCTGG GTAATCTGAT TGCGCTTGAT GTTCACTCCA CTGATTATTG TGGTGATTTT
AGTAATCCCG AAGGTGTAGC TGAAACTGTC AAAAAAATTC GCCCTGATGT TATTGTTAAT
GCGGCTGCTC ACACTGCAGT AGACAAAGCG GAATCAGAAC CGGAATTTGC ACAATTACTT
AACGCGACAA GTGTCGAAGC GATTGCAAAA GCAGCCAATG AAGTCGGTGC TTGGGTTATT
CACTACTCTA CTGACTACGT ATTTCCGGGA ACCGGTGAAA TACCGTGGCA GGAGACGGAT
GCTACAGCAC CTTTGAATGT TTATGGTGAA ACTAAACTAG CCGGAGAAAA AGCGTTACAG
AAACATTGCG CGAAGCATAT TATTTTCCGT ACCAGCTGGG TATATGCAGG TAAAGGAAAT
AACTTCGCCA AAACAATGTT GCGTCTGGCA AAAGAGCGCG AAGAACTGGC TGTGATAAAC
GATCAGTTTG GCGCACCAAC AGGTGCCGAA TTGCTGGCTG ATTGCACCGC TCATGCCATT
CGCGTAGCAG TAGACAAACC AGAAGTTGCT GGTTTGTACC ATCTGGTTGC TGGCGGTACA
ACAACCTGGC ACGATTATGC CGCTCTGGTA TTTGAAGAAG CGCGCAAAGC AGGGATTAAC
CTTGCTCTTA ACAAACTTAA CGCCGTGCCA ACAACGGCCT ATCCCACACC AGCCCGTCGA
CCCCATAACT CTCGCCTCAA TACAGAAAAG TTTCAGCAGA ACTTTGCGCT TGTCTTGCCT
GACTGGCAGG TGGGTGTGAA ACGAATGCTC AACGAATTAT TTACGACTAC GGCAATTTAA
|
|---|
| Protein sequence | MNILLFGKTG QVGWELQRAL APLGNLIALD VHSTDYCGDF SNPEGVAETV KKIRPDVIVN
AAAHTAVDKA ESEPEFAQLL NATSVEAIAK AANEVGAWVI HYSTDYVFPG TGEIPWQETD
ATAPLNVYGE TKLAGEKALQ KHCAKHIIFR TSWVYAGKGN NFAKTMLRLA KEREELAVIN
DQFGAPTGAE LLADCTAHAI RVAVDKPEVA GLYHLVAGGT TTWHDYAALV FEEARKAGIN
LALNKLNAVP TTAYPTPARR PHNSRLNTEK FQQNFALVLP DWQVGVKRML NELFTTTAI
|
|---|
| |