| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01589 |
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| Symbol | rnfC |
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| ID | 8113891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | + |
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| Start bp | 1651523 |
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| End bp | 1653604 |
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| Gene Length | 2082 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644847818 |
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| Product | hypothetical protein |
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| Protein accession | YP_002999391 |
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| Protein GI | 251785087 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00945839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAGT TATTCTCTGC ATTCAGAAAA AATAAAATCT GGGATTTCAA CGGCGGCATC
CATCCACCGG AGATGAAAAC CCAGTCCAAC GGTACACCCC TGCGCCAGGT ACCCCTGGCG
CAGCGTTTTG TTATTCCACT GAAACAGCAT ATTGGCGCTG AAGGTGAGTT GTGCGTTAGC
GTCGGCGATA AAGTATTGCG CGGCCAGCCG CTTACCCGTG GTCGCGGCAA AATGCTGCCT
GTTCACGCGC CCACCTCGGG TACCGTTACG GCTATTGCGC CCCACTCTAC GGCTCATCCT
TCAGCTTTAG CTGAATTAAG CGTGATTATT GATGCCGATG GTGAAGACTG CTGGATCCCG
CGCGACGGCT GGGCCGATTA TCGCACTCGC AGTCGCGAAG AGTTAATCGA GCGCATACAT
CAGTTTGGTG TTGCCGGGCT GGGCGGTGCA GGATTCCCGA CAGGCGTTAA ATTGCAGGGT
GGCGGAGATA AGATTGAAAC GTTGATTATC AACGCGGCTG AGTGCGAGCC GTACATTACC
GCCGATGACC GTTTGATGCA GGATTGCGCG GCTCAGGTCG TAGAGGGTAT TCGCATTCTT
GCGCATATTC TGCAGCCACG CGAAATTCTT ATCGGCATTG AAGATAACAA ACCGCAGGCG
ATTTCCATGC TGCGCGCGGT GCTGGCGGAC TCTAACGATA TTTCTCTGCG GGTGATTCCA
ACCAAATATC CTTCTGGCGG TGCTAAACAA TTAACCTACA TTCTGACCGG GAAGCAGGTT
CCACATGGCG GGCGTTCATC CGATATCGGC GTATTAATGC AAAACGTCGG CACTGCTTAT
GCAGTGAAAC GTGCCGTTAT TGATGGCGAG CCGATTACCG AGCGTGTTGT AACCCTGACT
GGCGAAGCAA TCGCTCGCCC GGGCAACGTC TGGGCACGGC TGGGGACGCC AGTGCGTCAT
TTATTGAATG ATGCCGGATT CTGCCCCTCT GCCGATCAAA TGGTGATTAT GGGTGGCCCG
CTAATGGGCT TTACCTTGCC ATGGCTGGAT GTCCCGGTCG TAAAGATTAC CAACTGTCTG
TTGGCTCCCT CTGCCAATGA ACTTGGCGAA CCACAGGAAG AACAAAGCTG CATCCGGTGT
AGCGCCTGTG CTGACGCCTG CCCTGCGGAT CTTTTGCCGC AACAGTTGTA CTGGTTCAGC
AAAGGTCAGC AACACGATAA AGCTACCACG CATAACATTG CTGATTGCAT TGAATGTGGG
GCTTGCGCGT GGGTTTGCCC GAGCAATATT CCCCTGGTGC AATATTTCCG TCAGGAAAAA
GCTGAAATTG CGGCTATTCG TCAGGAAGAA AAGCGCGCCG CAGAAGCCAA AGCGCGTTTC
GAAGCGCGCC AGGCTCGTCT GGAGCGCGAA AAAGCGGCTC GCCTTGAACG ACATAAGAGC
GCAGCCGTTC AACCTGCAGC CAAAGATAAA GATGCGATTG CTGCCGCTGT GGCGCGGGTG
AAAGAGAAAC AGGCCCAGGC TACACAGCCT ATTGTGATTA AAGCGGGCGA ACGCCCGGAT
AACAGTGCAA TTATTGCAGC ACGGGAAGCC CGTAAAGCGC AAGCCAGAGC GAAACAGGCA
GAACTGCAGC AAACTAACGA CGCAGCAACC GTTGCTGATC CACGTAAAAC TGCCGTTGAA
GCAGCTATCG CCCGCGCCAA AGCGCGCAAG CTGGAACAGC AACAGGCTAA TGCGGAACCA
GAAGAACAGG TCGATCCGCG CAAAGCCGCC GTCGAAGCCG CTATTGCCCG TGCCAAAGCA
CGCAAGCTGG AACAGCAACA GGCTAATGCC GAGCCAGAAC AACAGGTCGA TCCGCGCAAA
GCCGCCGTCG AAGCCGCTAT TGCCCGAGCC AAAGCGCGCA AACGGGAACA GCAACCGGCT
AATGCGGAGC CAGAAGAACA GGTTGATCCG CGCAAAGCTG CCGTCGAAGC GGCTATTGCA
CGCGCCAAAG CACGCAAGCT GGAACAGCAA CAGGCTAATG CGGTACCAGA AGAACAGGTT
GATCCGCGCA AAGCGGCAGT TGCCGCGGCT ATTGCCCGCG CT
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| Protein sequence | MLKLFSAFRK NKIWDFNGGI HPPEMKTQSN GTPLRQVPLA QRFVIPLKQH IGAEGELCVS
VGDKVLRGQP LTRGRGKMLP VHAPTSGTVT AIAPHSTAHP SALAELSVII DADGEDCWIP
RDGWADYRTR SREELIERIH QFGVAGLGGA GFPTGVKLQG GGDKIETLII NAAECEPYIT
ADDRLMQDCA AQVVEGIRIL AHILQPREIL IGIEDNKPQA ISMLRAVLAD SNDISLRVIP
TKYPSGGAKQ LTYILTGKQV PHGGRSSDIG VLMQNVGTAY AVKRAVIDGE PITERVVTLT
GEAIARPGNV WARLGTPVRH LLNDAGFCPS ADQMVIMGGP LMGFTLPWLD VPVVKITNCL
LAPSANELGE PQEEQSCIRC SACADACPAD LLPQQLYWFS KGQQHDKATT HNIADCIECG
ACAWVCPSNI PLVQYFRQEK AEIAAIRQEE KRAAEAKARF EARQARLERE KAARLERHKS
AAVQPAAKDK DAIAAAVARV KEKQAQATQP IVIKAGERPD NSAIIAAREA RKAQARAKQA
ELQQTNDAAT VADPRKTAVE AAIARAKARK LEQQQANAEP EEQVDPRKAA VEAAIARAKA
RKLEQQQANA EPEQQVDPRK AAVEAAIARA KARKREQQPA NAEPEEQVDP RKAAVEAAIA
RAKARKLEQQ QANAVPEEQV DPRKAAVAAA IARA
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