| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01328 |
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| Symbol | ydaM |
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| ID | 8114841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | - |
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| Start bp | 1391137 |
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| End bp | 1392369 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644847575 |
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| Product | hypothetical protein |
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| Protein accession | YP_002999148 |
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| Protein GI | 251784844 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.465042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACGC ACAACTTCAA TACCCTGGAC TTACTCACCA GTCCTGTCTG GATCGTTTCG
CCCTTTGAGG AACAGTTAAT TTATGCCAAT AGCGCGGCGA AACTGTTGAT GCAAGACCTC
ACGTTTAGTC AGCTACGAAC CGGACCCTAT TCCGTCTCCT CACAAAAAGA ACTGCCGAAA
TACCTCTCCG ATCTGCAAAA CCAACACGAT ATTATCGAAA TCCTCACTGT TCAGCGTAAA
GAAGAGGAAA CAGCATTGAG CTGTCGGCTT GTTTTGCGAA AGCTGACAGA AACAGAACCG
GTGATTATTT TCGAAGGTAT CGAAGCGCCG GCAACGCTGG GTTTAAAAGC CAGTCGCTCG
GCAAATTATC AGCGCAAAAA ACAAGGTTTT TATGCGCGCT TTTTTCTGAC TAACTCTGCA
CCAATGTTGT TGATTGACCC GTCACGAGAT GGACAAATCG TCGATGCTAA CCTCGCCGCG
CTCAATTTCT ATGGTTATAA CCATGAAACG ATGTGCCAGA AACATACCTG GGAAATAAAT
ATGCTCGGGC GTCGCGTCAT GCCTATCATG CATGAAATCT CGCATTTACC CGGTGGTCAT
AAACCTTTGA ATTTTGTTCA TAAACTGGCG GATGGTTCGA CTCGTCATGT GCAGACCTAT
GCCGGACCGA TTGAAATTTA TGGCGACAAG CTCATGTTAT GTATTGTGTA TGATATTACT
GAGCAAAAAC GGCTGGAGGA GCAGCTGGAA CATGCTGCTC ACCATGACGC GATGACCGGA
TTACTGAATC GGCGACAGTT TTATCACATT ACGGAACCAG GCCAAATGCA GCATCTCGCC
ATCGCTCAGG ATTACAGCTT GTTGCTCATC GACACCGATC GTTTTAAACA CATTAACGAT
CTCTATGGGC ATTCTAAAGG TGATGAGGTG TTATGCGCCC TCGCCCGCAC CCTCGAAAGT
TGCGCTCGCA AAGGCGATTT GGTGTTTCGT TGGGGAGGCG AAGAGTTTGT CTTATTGCTA
CCAAGAACCC CACTGGATAC CGCGCTTTCG CTGGCTGAAA CTATCCGCGT AAGCGTGGCA
AAAGTGAGTA TTTCGGGCTT ACCACGCTTT ACCGTCAGCA TTGGTGTGGC GCATCACGAA
GGAAATGAAA GCATCGATGA ACTGTTTAAA CGCGTTGATG ATGCTTTGTA TCGGGCGAAA
AATGATGGAC GCAACCGCGT GCTGGCGGCA TAA
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| Protein sequence | MITHNFNTLD LLTSPVWIVS PFEEQLIYAN SAAKLLMQDL TFSQLRTGPY SVSSQKELPK
YLSDLQNQHD IIEILTVQRK EEETALSCRL VLRKLTETEP VIIFEGIEAP ATLGLKASRS
ANYQRKKQGF YARFFLTNSA PMLLIDPSRD GQIVDANLAA LNFYGYNHET MCQKHTWEIN
MLGRRVMPIM HEISHLPGGH KPLNFVHKLA DGSTRHVQTY AGPIEIYGDK LMLCIVYDIT
EQKRLEEQLE HAAHHDAMTG LLNRRQFYHI TEPGQMQHLA IAQDYSLLLI DTDRFKHIND
LYGHSKGDEV LCALARTLES CARKGDLVFR WGGEEFVLLL PRTPLDTALS LAETIRVSVA
KVSISGLPRF TVSIGVAHHE GNESIDELFK RVDDALYRAK NDGRNRVLAA
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