Gene B21_01273 details

Gene Information

• Locus tag: B21_01273
• Symbol: gmr
• ID: 8114814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: -
• Start bp: 1330531
• End bp: 1332516
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644847522
• Product: hypothetical protein
• Protein accession: YP_002999095
• Protein GI: 251784791
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.475584
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCG TTAGGGAGTC CACAACGTTG TACAACTTTC TCGGATCGCA CAATTCATAC 
TGGCGGTTGA CGGAAAGCAG CGATGTTTTG CGCTTTTCTA CCACCGAAAC CACAGAACCT 
GAACGTATGT TGCAGTTATC TGCCGAACAG GCTGCTCGAA TCAGGGAAAT GACGGTCATC 
ACCTCCAGCC TGATGATGAG TCTGACCGTC GATGAAAGCG ATCTTTCTGT GCATCTGGTA 
GGACGAAAAA TCAATAAACG GGAATGGGCT GGCAACGCGT CTGCATGGCA TGACACACCG 
GCGGTTGCTC GTGATTTATC ACACGGGCTT TCCTTTGCTG AGCAGGTAGT TTCTGAAGCA 
CATTCCGCAA TAGTCATTCT CGACAGCCGG GGGAATATTC AACGCTTCAA TCGCTTATGT 
GAAGATTACA CAGGGTTGAA AGAACACGAC GTCATTGGGC AAAGCGTGTT TAAACTGTTT 
ATGAGCCGTC GTGAAGCTGC GGCATCCAGG CGCAATAACC GTGTATTTTT TCGAAGCGGC 
AATGCATATG AAGTCGAACT GTGGATACCA ACACGTAAAG GCCAGCGGCT GTTTCTGTTT 
CGCAATAAAT TTGTCCACAG CGGCAGTGGC AAAAACGAGA TTTTTTTAAT CTGTTCCGGT 
ACCGACATTA CCGAAGAGCG CCGCGCTCAG GAGCGACTGC GTATTCTGGC AAATACCGAC 
AGTATCACCG GACTGCCGAA TCGTAACGCA ATGCAGGAGT TAATCGATCA CGCTATTAAT 
CATGCAGATA ACAATAAAGT TGGGGTTGTG TATCTTGATT TGGATAATTT TAAAAAGGTC 
AACGACGCCT ATGGGCATTT GTTTGGTGAC CAGTTATTAC GCGACGTGTC ATTGGCTATT 
TTAAGCTGTC TCGAACATGA CCAGGTGTTG GCGCGTCCAG GTGGCGATGA GTTTCTGGTA 
CTGGCATCCA ATACCTCACA AAGTGCGCTG GAAGCAATGG CATCACGAAT TTTGACCCGC 
TTACGCCTCC CCTTTCGTAT TGGTTTAATT GAAGTTTATA CCAGCTGTTC AGTAGGTATT 
GCACTCTCTC CCGAACATGG TTCGGACAGC GCGGCTATTA TTCGTCACGC CGACACAGCA 
ATGTACACAG CGAAGGAAGG CGGACGAGGA CAATTTTGCG TTTTTACCCC AGAAATGAAT 
CAACGGGTAT TTGAATATCT CTGGCTGGAT ACCAACTTTC GTAAAGCACT AGAAAACGAT 
CAGTTGGTTA TTCACTATCA ACCGAAAATC ACCTGGCGTG GCGAAGTGCG CAGTCTGGAA 
GCACTAGTAC GTTGGCAGTC ACCTGAACGT GGGTTGATTC CACCGTTGGA CTTCATTTCC 
TACGCCGAAG AGTCAGGGCT AATTGTGCCT TTAGGCCGTT GGGTGATTCT CGATGTCGTA 
CGCCAGGTGG CAAAGTGGCG GGATAAAGGC ATAAACCTGC GAGTGGCGGT AAATATTTCT 
GCACGTCAGC TCGCCGATCA AACCATTTTC ACCGCCCTGA AACAGGTTCT CCAGGAACTC 
AATTTTGAAT ACTGCCCTAT AGATGTTGAA CTGACAGAGA GTTGTCTGAT TGAGAATGAT 
GAACTGGCAC TGTCTGTTAT TCAACAATTT AGCCAACTAG GTGCGCAAGT ACATCTGGAT 
GATTTTGGTA CCGGCTACTC TTCACTTTCG CAACTGGCGC GCTTTCCGAT CGATGCCATC 
AAACTTGACC AGGTTTTTGT TCGAGATATT CACAAACAAC CTGTCTCGCA GTCACTGGTC 
CGGGCGATCG TCGCTGTGGC CCAGGCATTG AATCTTCAGG TGATCGCCGA AGGTGTAGAG 
AGTGCAAAGG AAGATGCTTT TTTAACCAAG AACGGGATCA ATGAGCGGCA AGGATTTTTG 
TTTGCCAAAC CGATGCCCGC CGTCGCCTTC GAACGCTGGT ATAAACGCTA TCTGAAGCGC 
GCATAA 

 

Protein sequence

MKTVRESTTL YNFLGSHNSY WRLTESSDVL RFSTTETTEP ERMLQLSAEQ AARIREMTVI 
TSSLMMSLTV DESDLSVHLV GRKINKREWA GNASAWHDTP AVARDLSHGL SFAEQVVSEA 
HSAIVILDSR GNIQRFNRLC EDYTGLKEHD VIGQSVFKLF MSRREAAASR RNNRVFFRSG 
NAYEVELWIP TRKGQRLFLF RNKFVHSGSG KNEIFLICSG TDITEERRAQ ERLRILANTD 
SITGLPNRNA MQELIDHAIN HADNNKVGVV YLDLDNFKKV NDAYGHLFGD QLLRDVSLAI 
LSCLEHDQVL ARPGGDEFLV LASNTSQSAL EAMASRILTR LRLPFRIGLI EVYTSCSVGI 
ALSPEHGSDS AAIIRHADTA MYTAKEGGRG QFCVFTPEMN QRVFEYLWLD TNFRKALEND 
QLVIHYQPKI TWRGEVRSLE ALVRWQSPER GLIPPLDFIS YAEESGLIVP LGRWVILDVV 
RQVAKWRDKG INLRVAVNIS ARQLADQTIF TALKQVLQEL NFEYCPIDVE LTESCLIEND 
ELALSVIQQF SQLGAQVHLD DFGTGYSSLS QLARFPIDAI KLDQVFVRDI HKQPVSQSLV 
RAIVAVAQAL NLQVIAEGVE SAKEDAFLTK NGINERQGFL FAKPMPAVAF ERWYKRYLKR 
A