| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01022 |
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| Symbol | ycdM |
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| ID | 8115984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | - |
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| Start bp | 1076555 |
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| End bp | 1077703 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644847284 |
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| Product | hypothetical protein |
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| Protein accession | YP_002998857 |
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| Protein GI | 251784553 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03612] pyrimidine utilization protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGACG CAGTGCCCCG TCTGACTTTC ACTTTACGAG ACGAAGAGAG GTTGATGATG
AAAATTGGCG TATTCGTACC TATTGGCAAC AACGGCTGGC TCATTTCGAC CCACGCGCCG
CAGTACATGC CGACCTTTGA ACTGAATAAA GCCATCGTGC AAAAAGCGGA GCACTACCAT
TTCGATTTCG CCCTGTCGAT GATCAAACTG CGTGGCTTTG GCGGCAAAAC TGAGTTCTGG
GATCACAACC TTGAGTCGTT CACCTTGATG GCGGGGCTGG CGGCCGTGAC CTCGCGCATT
CAGATTTACG CCACCGCCGC CACCTTAACG TTACCTCCAG CAATCGTCGC CCGTATGGCC
GCAACCATCG ACTCAATCTC TGGCGGGCGT TTTGGCGTCA ACCTCGTGAC TGGCTGGCAA
AAGCCCGAGT ATGAGCAGAT GGGTATCTGG CCTGGCGATG ACTATTTCTC CCGTCGTTAC
GACTATCTCA CCGAGTATGT TCAGGTGCTG CGCGACCTGT GGGGCACGGG AAAAAGCGAT
TTTAAAGGCG ATTTTTTCAC CATGAATGAT TGTCGCGTCA GTCCGCAACC GAGTGTCCCT
ATGAAAGTGA TCTGCGCCGG GCAAAGCGAC GCTGGCATGG CGTTCTCCGC CCAGTATGCC
GATTTCAACT TCTGTTTCGG CAAAGGCGTA AATACACCCA CGGCTTTCGC CCCGACCGCT
GCGCGGATGA AACAGGCCGC AGAGCAAACC GGGCGCGACG TTGGCTCTTA TGTATTGTTT
ATGGTGATTG CCGATGAAAC CGACGATGCC GCTCGCGCCA AATGGGAACA CTACAAAGCG
GGCGCGGATG AAGAGGCGTT AAGCTGGCTA ACCGAACAAA GTCAGAAAGA TACCCGCTCA
GGTACTGACA CCAACGTCCG TCAGATGGCC GATCCCACTT CGGCGGTAAA CATCAATATG
GGGACGTTAG TCGGTTCTTA CGCCAGTGTC GCGCGCATGT TAGATGAAGT CGCAAGCGTG
CCTGGTGCCG AAGGCGTGCT GTTAACCTTC GACGATTTTC TGTCGGGAAT CGAAACCTTC
GGCGAGCGCA TTCAACCACT GATGCAGTGC CGCGCCCATC TCCCTGTGCT GACTCAGGAG
GTGGCATGA
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| Protein sequence | MQDAVPRLTF TLRDEERLMM KIGVFVPIGN NGWLISTHAP QYMPTFELNK AIVQKAEHYH
FDFALSMIKL RGFGGKTEFW DHNLESFTLM AGLAAVTSRI QIYATAATLT LPPAIVARMA
ATIDSISGGR FGVNLVTGWQ KPEYEQMGIW PGDDYFSRRY DYLTEYVQVL RDLWGTGKSD
FKGDFFTMND CRVSPQPSVP MKVICAGQSD AGMAFSAQYA DFNFCFGKGV NTPTAFAPTA
ARMKQAAEQT GRDVGSYVLF MVIADETDDA ARAKWEHYKA GADEEALSWL TEQSQKDTRS
GTDTNVRQMA DPTSAVNINM GTLVGSYASV ARMLDEVASV PGAEGVLLTF DDFLSGIETF
GERIQPLMQC RAHLPVLTQE VA
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