Gene Avin_52340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_52340 
Symbol 
ID7764069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5348793 
End bp5349866 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content53% 
IMG OID643808047 
Productcytoplasmic protein 
Protein accessionYP_002802281 
Protein GI226947208 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGA AGAAACAGGC AGGTCCCCTC GCTCGTTCCT CGGCTGCGGA GTATCTAACT 
TACATCGCTG CCACAGGCGA CCAACCGCAG TCCGTGGAAA TGCGCTATGA AGATGAAAAC
ATCTGGCTGA CGCAGAAGAT GATGGCAGCG CTTTACGATG TCACTGTGCC TGCCATCAAT
CAGCATCTGA AGCGCGTGTT CGATGATGGT GAGTTGCTGC CGGAGGCAGT TATTAAGGAT
TACTTAATAA CTGCTAGCGA TGGAAAGAAC TACCGCGCCA AGCATTACAA CCTCCAGGCC
ATCATCGCTG TTGGCTTCAA GATCAACAAC GAGCGTGCTG TGCAGTTCCG CAAGTGGGCG
GGGCAAATCG TCAAGGACTA CACCATCCAG GGCTGGGCCA TGGACGTGGA TCGCCTGAAG
AAAGGGCATA TGTTCACGGA TGAGTATTTC GATCGTCAGT TGGAATACAT CCGTGAAATT
CGCCTGTCGG AACGCAAGTT CTACCAGAAG ATCACGGATC TGTACGCGAC TGCCTTCGAT
TACGATAGGG ATGCACAGAC CACGCGGGCA TTTTTCGCGC TGGTACAGAA CAAGCTGCAC
TGGGCAGTGC ATCGTCACAC TGCCGCAGAA CTGATCGTGG CACGTGCCGA TGCAGACAAG
ACAAATATGG GGCTGACGCA CTGGGAAGCC GCACCTCATG GAAAGATCGT CAAGTCGGAT
GTTTCGGTGG CCAAGAACTA CCTGAATACA CAGGAGCTGG ATTATCTGGA ACGGATCGTT
TCGATCTATC TGGAATTTGC GGAGCTGCAA GCGATTCGAA AAATCCCTAT GTCCATGCAG
GACTGGGCCA GACGACTGGA TGGTTTCCTG GAATTCAACG GCAACGAGAT ATTGACCGGG
CCGGGAAAGA TTTCGCATGA ACAGGCGAAA TTACACGCCG AAAGCGAATT CGAGAAATAC
CGCATCGTGC AGGACAGGCT GTTCGAGAGC GATTTCGACC GGATGTTGAA GCAGCTTGAG
GTTGATCACC CTAGCCAGGG CAGCGACCAG AACAAGAATG AGGGGAAAGC ATGA
 
Protein sequence
MTKKKQAGPL ARSSAAEYLT YIAATGDQPQ SVEMRYEDEN IWLTQKMMAA LYDVTVPAIN 
QHLKRVFDDG ELLPEAVIKD YLITASDGKN YRAKHYNLQA IIAVGFKINN ERAVQFRKWA
GQIVKDYTIQ GWAMDVDRLK KGHMFTDEYF DRQLEYIREI RLSERKFYQK ITDLYATAFD
YDRDAQTTRA FFALVQNKLH WAVHRHTAAE LIVARADADK TNMGLTHWEA APHGKIVKSD
VSVAKNYLNT QELDYLERIV SIYLEFAELQ AIRKIPMSMQ DWARRLDGFL EFNGNEILTG
PGKISHEQAK LHAESEFEKY RIVQDRLFES DFDRMLKQLE VDHPSQGSDQ NKNEGKA