Gene Avin_52070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_52070 
Symbol 
ID7764044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5315143 
End bp5317875 
Gene Length2733 bp 
Protein Length910 aa 
Translation table11 
GC content71% 
IMG OID643808023 
Producthypothetical protein 
Protein accessionYP_002802257 
Protein GI226947184 
COG category[S] Function unknown 
COG ID[COG4458] Uncharacterized protein conserved in bacteria, putative virulence factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTACC CTGACCAATC CCCCGAACGC CTGTCCCAGA GCTGGTCCGC CGTCTACGGC 
GGGGCGGGCG AGGCGATCCG CTGGATCGAC GAGGTGCGCC GCAGCGCGCC GCGCCTGGAC
AACGAGGCCG ACGACCTGAT CCTCAGCCTG CGCCGCGTGC GCAACACCGC GCGGCGTCTC
GGCGCGGTTT CCGCGCTGCC GATGACCGTG GGCTTCTTCG GCCTGTCCCA GGCCGGCAAG
TCCTACCTGA TCGCCACCCT CGCCGCCGGC GCCAACGGCA AGCTGGAAAC CGACCTGGGC
GGCGACCACC TGGACTTCCT TGTCCACGTC AACCCGCCGG GCAGCGGCAA GGAGGCCACC
GGGCTGGTCA CCCGTTTCAG CCGTACCGCC CGGCCGGGGC CGGCGGAGTT CCCGCTGGAA
CTCAAGCTGT TCGCCGAGAT CGAGCTGGCC AAGGTGCTCG CCAACTCCTT CTTCAATGAC
TTCAACACCG AGAAGGTGCG CTACCGCTTC GAGGAGGCGG CGATCCGCCA ATTGCTCCGC
GAGCTGGAGC GGCGCCGCCA GCCCTATCCG GTGCCGGGCG TCGACGCCGA TGCCGTGGTA
GACCTGTGGG ACTACCTGCA GGGCAGCTTT CCGGGTTCGC TGGGCGCGCT GGCGGCCTAC
TACTGGCCGG CCGCCGTCGA GCTGGCGCCG CGCCTGGCGC TGGAAGACCG CGCCCGGCTG
TTCTCGATCT TCTGGGGCGA GATCCCCGAA CTGAGCGACA CCTACCTGGC CTTCGCCCGT
ACCCTGACCA GCCTGGGCCA CGCCGAACGG GTCTTCGCGC CGCTGGGCGC CCTGGTGCGG
CCGACGCCGC AGGGCGGGCT GTCGCAGGCC GACAGCATCA TGAACGTGGA CATGCTCGAA
CGCCTCGGCC GGGACAACGA CCTGCGCATC GCCGTGCGTC CGTGGAAGGA CGGCGCCCTG
GGCGCCGAGG TCGAGCTGAC CCTGGCGCAA CTGGCGGCGC TCACCGCCGA GCTGGTCTTC
CCGCTGGTCG AGCCGACCAG TGAACCGCTC TGCGAAGAGG TCGACCTGCT CGACTTCCCC
GGCTACCGCG GCCGGCTCGG CGTCGAGTCG CTGGACGAGG TGCGCCGCGC GGTGAACAAC
GAGGACAGCA ACCCGGTGGC GCAGCTCCTC CTGCGCGGCA AGGTCGCCTA TCTCTTCGAG
CGTTACACCG ACAGCCAGGA AATGAACGTG CTGATCGTCT GCACGCCGTC GAACAAGCAG
TCGGACGTCA CCAGCGTCGG CCCGGTGCTG AGCCGCTGGA TCGACCGCAC CCAGGGCGAG
ACGCCGGCCG AGCGGGCGCG CCGCAAGCCG GGCCTGTTGT GGGCGATCAC CATGTTCGAC
ATGCGCATCG GCAGCGACCT GGACAAGGGC GAGGACCTGC TGCGCCTGGG CTGGGGCAGC
GGCGGCATGA TGAAGATGAC CATGCTGGAA CGCTTCGGCC AGTACGCCTG GCTGCAGGAC
TGGGCCGACG GCCGGCCGTT CGACAATACC TTCCTGGTGC GCAAGCCGCG CATGAAGGTG
ACCTTCCTCG ACCTCGACGG CGGCCGGGAA ACGGCCATCC ACGAGGCCGC TCGCGAGTCG
CTGGCGCTGA TGCGCCAGAC CTTCTGCGAG GACGAGACGG TCCGCCGCCA CGTCCGCGAC
CCCGAGGAAG CCTGGGACGC CATGCTGGCG CTGAACGACG GCGGCATGGG CCGCATCGGC
CGCTACCTGC GCCAGGTCGC CCTGCGCGAG GTCAAGCAGG GGCGCATCCG CGAGCAACTG
GATGCCATCC TGCACCTGAT CGAGAACCGC CTCGGCCACT GGTTCCAGGC CGAGGGCGCC
GGCGAGCTGG AGCGCAAGCG GCGCATCGCC CGGCAGATCT CCGACGCCCT GTGGCCGCGG
CGCCTGCTGC TCGGCGAGCT GCTGCAGCGC ATGCAGCTCC CGGACGACCT GCTGCGCGCG
CTCTACCTGC GCGCCGGCGA GGAAGACGAA GCGCCGCCGC CGGCCGCCGG CGAACGCCTG
CTGCCGGGCG CCGCACCGCT GGCCGGGGCG CTCAATCTCG GCCTCGACCT GAACGGCGAC
GACAGTTTCG ATCCCTTCGG CGACAATGGC CCTTCCGGCG CGGTGCCCGC GGCGCCGGCG
CGGCAGGCGC GCGGTAGCGA CGCGCGCTTC GCCCAGGCGG TGCTGCGCGA GTGGATCGGC
CACCTGCGCC ACCTGCCCGA GGACGTGCGC CTGATGACCT ACCTGGGCTT TGCCAAGCCG
GCGGTCGAGG CTCTGATCGA CGAACTGGTC ACCGGCGCCA GCCGCCTCGG CCTGGAGCAG
CGCCTGTTGC AGGCGATCGT CAGTACCGAG CAGGTCGGTA CCAAACGCGA GCAGCTCGCC
GGCCGCCAGG TGCTCACCGC CAAGACGGTG CTCGGCGACT TCATCGGCTG GCTGGGCTTC
ATCGAGCAGT CCCTCGAACA ACGCCCGGAC AGCCGCATCG AGCGCGACGC CAGGCTGTTC
CAGCCGGCGC CGCCGATCGC CCCGGGCCAG TTGCCGCGCC TGACGGAGCA ACCCCAGGAC
TACACCCGGC GCTACGTCGG CGACTGGCTG GTGGCCCTGG CGCGGATCGC CGAGGAAAAT
GCCGGACACA GCGCCGGCCG GGAAATCAGC CTCGAAGAGA ACGAAGCGCT GGGCCGCATC
CTCGCCACCT TCCAATCGGC ACGGGCAGAC TGA
 
Protein sequence
MTYPDQSPER LSQSWSAVYG GAGEAIRWID EVRRSAPRLD NEADDLILSL RRVRNTARRL 
GAVSALPMTV GFFGLSQAGK SYLIATLAAG ANGKLETDLG GDHLDFLVHV NPPGSGKEAT
GLVTRFSRTA RPGPAEFPLE LKLFAEIELA KVLANSFFND FNTEKVRYRF EEAAIRQLLR
ELERRRQPYP VPGVDADAVV DLWDYLQGSF PGSLGALAAY YWPAAVELAP RLALEDRARL
FSIFWGEIPE LSDTYLAFAR TLTSLGHAER VFAPLGALVR PTPQGGLSQA DSIMNVDMLE
RLGRDNDLRI AVRPWKDGAL GAEVELTLAQ LAALTAELVF PLVEPTSEPL CEEVDLLDFP
GYRGRLGVES LDEVRRAVNN EDSNPVAQLL LRGKVAYLFE RYTDSQEMNV LIVCTPSNKQ
SDVTSVGPVL SRWIDRTQGE TPAERARRKP GLLWAITMFD MRIGSDLDKG EDLLRLGWGS
GGMMKMTMLE RFGQYAWLQD WADGRPFDNT FLVRKPRMKV TFLDLDGGRE TAIHEAARES
LALMRQTFCE DETVRRHVRD PEEAWDAMLA LNDGGMGRIG RYLRQVALRE VKQGRIREQL
DAILHLIENR LGHWFQAEGA GELERKRRIA RQISDALWPR RLLLGELLQR MQLPDDLLRA
LYLRAGEEDE APPPAAGERL LPGAAPLAGA LNLGLDLNGD DSFDPFGDNG PSGAVPAAPA
RQARGSDARF AQAVLREWIG HLRHLPEDVR LMTYLGFAKP AVEALIDELV TGASRLGLEQ
RLLQAIVSTE QVGTKREQLA GRQVLTAKTV LGDFIGWLGF IEQSLEQRPD SRIERDARLF
QPAPPIAPGQ LPRLTEQPQD YTRRYVGDWL VALARIAEEN AGHSAGREIS LEENEALGRI
LATFQSARAD