Gene Avin_51580 details

Gene Information

• Locus tag: Avin_51580
• Symbol: hbdH
• ID: 7763997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 5246631
• End bp: 5247257
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643807976
• Product: hydroxybutyryl-CoA dehydrogenase
• Protein accession: YP_002802210
• Protein GI: 226947137
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1250] 3-hydroxyacyl-CoA dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.146553
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTCAC CTTGCATCGC GATCCTCGGC TCCGGTTCGA TGGGCGTCGG CATCGCCACC 
CATCTGGCGC GCCATGGCCA TGAGGTTCTG CTGATCTACC CGTCGATGGA ACAACTCGCC 
GAAGTCCTCG CCATGGCTCG GAGCATCCTG GCGGGGCTGG TCGAGGCCGG CCGCTTCGCC 
CCCGAGCAGG TGGCGGCGAC CCTGGCGCGG CTGCGTACCA GTACGCGGCT CAAGGACGTC 
GCCGGAGTGC GGTTGCTCAT CGAAACGCTT CCCGAGCGGA TCGAACTCAA GCGGGCGCTC 
TATGCCGAAC TGGAGCGGAT CGTCGATGCC GAGGCGGTCA TCGCCAGCGA CACCGGCGGC 
CTGTCCCCCG AGCGGCTGGC CGAGGGCATG CGCCATCCCG GCCGGTTGCT GATCGCCCAT 
TTCCGCAGCC CGCCGCACCG TGTTCCGCTG GTGGCGGTGG TTGCGGGCCG CCAGACTCGC 
AGCGAGCATC TGGCGTATGT CCGGACGCTG CTGGCGGGAA CGAATCTGGA AGTCGTCGTG 
GTGCCGGACG GGGCCGCCGA TTGTCTGTCG CCCGGGCCCG CCCGGAGCCG AGAGTGGCGG 
GCGGAGCCGG AGCGGCCGGC GAAGTAG 

 

Protein sequence

MTSPCIAILG SGSMGVGIAT HLARHGHEVL LIYPSMEQLA EVLAMARSIL AGLVEAGRFA 
PEQVAATLAR LRTSTRLKDV AGVRLLIETL PERIELKRAL YAELERIVDA EAVIASDTGG 
LSPERLAEGM RHPGRLLIAH FRSPPHRVPL VAVVAGRQTR SEHLAYVRTL LAGTNLEVVV 
VPDGAADCLS PGPARSREWR AEPERPAK