Gene Avin_50830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_50830 
Symbol 
ID7763931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp5151929 
End bp5152381 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content73% 
IMG OID643807911 
Producthypothetical protein 
Protein accessionYP_002802145 
Protein GI226947072 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0626343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCT CCGGCACGGG CATCCGGCCG CCGCTGTTCG AGCGGCTGGC CGCCACGGCG 
GAAGACCGCG GCAGCGCGGA TTTCGACCGG CAAGCGCTGG CCGACTCGGT GCGCGGCGAG 
CTGCTGCGGC TACTCAACAC CCGCCGCGGC TCGCGGCCGC TCACCACCCC GGCGAGCGTG 
CTCGACTACG GCATCGCCGA CTGGAGCGCG CTGCAGGCCG AACGCAGCGC CGACCGCCGG 
CAGTTGAGCC GGGAAATCCG CGACGCCATC CTGCGGTTCG AACCGCGCCT GCAACCGGGC 
GAAATCGAGC TGCTGTCCAT CGAGGGCCAG CGCCAGCGAC TGCGCGTGCG CCTGAACGGC 
GTCCTGCGCG GCGGGGAGCG GTGCTGGCCG GTGTCGTTCC TGATCGAGGA CGGCGCGGAC 
GGTTTCGAGG TGCGCCATGA GCGACTCGAT TGA
 
Protein sequence
MGASGTGIRP PLFERLAATA EDRGSADFDR QALADSVRGE LLRLLNTRRG SRPLTTPASV 
LDYGIADWSA LQAERSADRR QLSREIRDAI LRFEPRLQPG EIELLSIEGQ RQRLRVRLNG 
VLRGGERCWP VSFLIEDGAD GFEVRHERLD