| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_50460 |
|---|
| Symbol | hypC |
|---|
| ID | 7763895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 5113952 |
|---|
| End bp | 5114206 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643807875 |
|---|
| Product | hydrogenase assembly chaperone HypC/HupF |
|---|
| Protein accession | YP_002802109 |
|---|
| Protein GI | 226947036 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0298] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0945297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCTGG CCATTCCGGT CCGCATCGAG GAACTGCTCG ACGAGCAGAG TGCGGTCGCC
TGCATCGGCG GCCTGCGCAA GACCATCAAC GTCGCCCTGC TCGACGATCT GAAAGTGGGC
GACTACGTGA TCCTGCACGT CGGCTTCGCC CTGCAGAAGC TCGACGAGGC CGAGGCGCAG
CGCACCCTGG CGCTGCTCGC CGAGTTGGGC CGATTGGCCG AGGCCGAGCA GGCCGCGCAG
GGAGAGGCGC CATGA
|
|---|
| Protein sequence | MCLAIPVRIE ELLDEQSAVA CIGGLRKTIN VALLDDLKVG DYVILHVGFA LQKLDEAEAQ
RTLALLAELG RLAEAEQAAQ GEAP
|
|---|
| |