Gene Avin_50400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_50400 
Symbol 
ID7763889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5109215 
End bp5109778 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content73% 
IMG OID643807869 
ProductHupE/UreJ protein 
Protein accessionYP_002802103 
Protein GI226947030 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAC GCCACTTTCT CCCCCTGCTT GCCCTGACCC TCCTGCCCGG CGCCGCCTTC 
GCCCATCCCG GGCATGGCGG GAACGGCCTG ATCGCCGGCC TGCTGCATCC TCTCGGCGGC
CTGGACCACC TGCTGGCGAT GCTGGCCATC GGCATCTGGG CCGCACAACA GCCGCGCAGC
CTGAAACTCG CCGTGCCGGC CACCTTTCTC GTCGCGCTGC TCGGCGGCTT CGTGCTGGCC
ATGACCGGTA CCGGCCTGCC GCAGGTGGAA ACCGGCATCG CCCTCTCCGT GCTGCTGAGC
GGCCTGCTGA TCGCCTGCGC CGCCCGCCTG CCGGCGCCGG TCGCGCTGAC CCTGACCGCG
GTCTTCGCCC TGTTCCACGG CCATGCCCAC GGCCTCGAAG TCAGCGGCAA CCCGCTGGGC
TTCGCCGCCG GCTTCCTCGC CGCCAGCCTG GGCCTGCTCC TCGGCGGCGG CCTGCTCGAC
GCGGCCGTGC AGCGGCGCCT GCCCCTGCTG ACCCGCGGCG TCGGCGCGGC CATCACCGCC
AGCGGCGCAC TGATGATGCT CTGA
 
Protein sequence
MRTRHFLPLL ALTLLPGAAF AHPGHGGNGL IAGLLHPLGG LDHLLAMLAI GIWAAQQPRS 
LKLAVPATFL VALLGGFVLA MTGTGLPQVE TGIALSVLLS GLLIACAARL PAPVALTLTA
VFALFHGHAH GLEVSGNPLG FAAGFLAASL GLLLGGGLLD AAVQRRLPLL TRGVGAAITA
SGALMML