Gene Avin_50090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_50090 
Symbol 
ID7763860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5075852 
End bp5076694 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content71% 
IMG OID643807840 
Productmyo-inositol catabolism protein 
Protein accessionYP_002802074 
Protein GI226947001 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4130] Predicted sugar epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGT CCCTTCCCTT CGCCCTGAAC CGCATCGTCG CCCCGTCCCT GCCGCTGGCC 
GAATTCCTCG ACCTGGCGCT CGCCCTGAAG GCCGACAGCA TCGAGCTGCG CAACGACCTC
AAGGGCATCG AGATCGAGGA CGGCACGCCG CCCGAGCGGG TCCGCGAGCT GTGCCGGGCC
AAGGGTATCC GTGTGCTGAG CATCAACGCC CTCTACCCCT TCGACGTCTG GAACGACGCG
CTTCGCGCCA AGGCGCTGAA GCTCGCCGCC TACGCCCGCG ACTGCGGCGC CGAGGGGCTG
GTGCTCTGCC CGCTGAACGA CCCGAGCGAT TCGCGCGACC GCGCCGAGCG GGTCCGGGGA
CTGCGCACCG CGCTGACCGC GCTGGCGCCG ATCCTGCGCG AGCACGGTCT GCTCGGCTTC
GTCGAACCGC TGGGCTTCGA GAGCAGCGCG CTGCGCCGCA AGCACGATGC CGTGGAGGCG
ATCAAGGGCA TCGGCGGACT GGACGTGTTC CGCCTGGTCC ACGACACCTT CCACCACCAC
CTGGCCGGCG AGCAGGAATT CTTCCCCGAG CTGACCGGCA TCGTGCACAT CTCCGGGGTC
GAGGACCGCC AGGTCGCCCT GGCCGATATC CGCGACGGCC ACCGCGTGCT GGTCGGCGAG
GCCGACATCC TCGGCAACGC CGCGCAGATC CGCCGCCTGC TGGAGCTGGG CTACCGCGGT
CCGTTCTCCT TCGAGCCCTT CGCCGACAGC GTGCACGCCC TGCCCGAGGT CCGCCCGGCG
TTGCAGAACA GCATGCAGCA CCTGCAGGCG CGCGTCGCGC CCCCCGAAGG CTGCACCGCG
TAA
 
Protein sequence
MTASLPFALN RIVAPSLPLA EFLDLALALK ADSIELRNDL KGIEIEDGTP PERVRELCRA 
KGIRVLSINA LYPFDVWNDA LRAKALKLAA YARDCGAEGL VLCPLNDPSD SRDRAERVRG
LRTALTALAP ILREHGLLGF VEPLGFESSA LRRKHDAVEA IKGIGGLDVF RLVHDTFHHH
LAGEQEFFPE LTGIVHISGV EDRQVALADI RDGHRVLVGE ADILGNAAQI RRLLELGYRG
PFSFEPFADS VHALPEVRPA LQNSMQHLQA RVAPPEGCTA