Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_48500 |
Symbol | ubiC |
ID | 7763709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4911286 |
End bp | 4911837 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643807691 |
Product | Chorismate lyase |
Protein accession | YP_002801926 |
Protein GI | 226946853 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCTG CTCCCGCTTT CCAATGGCTC GGCGCCGACC AACTGCATCC CGCCCCCCCG GCCGTCCTGG CCGACTGGCT GTTCGACAGC GGCTCGCTGA CCCGCCGGCT GACCGCCCTT TCCGCCGGCC GTTTCGCCGT GACGCCGCTG GCCGAAGGCT GGCAGGTGCT GCGCGACGAC GAATGCACCG CCCTCGACGT GGTGCCGGGC AGCACCGGCT GGGTACGCGA GGTCTACCTG CTCGGCGCCG AGCGGCCCTG GGTGTTCGCC CGCAGCGTGG CGGCCCGCGA GGCTCTGGCG GGTTTCTCCG GCGTACTCGC CGAACTCGGC CGGCGGCCCC TCGGCGAACT GCTGTTCAGC GACCCAGCCT TCGCCCGCGG CCCGCTGCAG GCCACGCACT ATCCGCCGGA CTGGCTGCCG GCCGGGATAC GCTGCCCCGG ACTCTGGGGA CGGCGCTCCC GTTTCCACCG GGAAACCCTG AGCGTGCTGG TGGCGGAAGT CTTCCTGCCG GAGCTCTGGC GCTACCAGGG AATCGACCCG GACACCCTAT AA
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Protein sequence | MTAAPAFQWL GADQLHPAPP AVLADWLFDS GSLTRRLTAL SAGRFAVTPL AEGWQVLRDD ECTALDVVPG STGWVREVYL LGAERPWVFA RSVAAREALA GFSGVLAELG RRPLGELLFS DPAFARGPLQ ATHYPPDWLP AGIRCPGLWG RRSRFHRETL SVLVAEVFLP ELWRYQGIDP DTL
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