Gene Avin_48500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_48500 
SymbolubiC 
ID7763709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4911286 
End bp4911837 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID643807691 
ProductChorismate lyase 
Protein accessionYP_002801926 
Protein GI226946853 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCTG CTCCCGCTTT CCAATGGCTC GGCGCCGACC AACTGCATCC CGCCCCCCCG 
GCCGTCCTGG CCGACTGGCT GTTCGACAGC GGCTCGCTGA CCCGCCGGCT GACCGCCCTT
TCCGCCGGCC GTTTCGCCGT GACGCCGCTG GCCGAAGGCT GGCAGGTGCT GCGCGACGAC
GAATGCACCG CCCTCGACGT GGTGCCGGGC AGCACCGGCT GGGTACGCGA GGTCTACCTG
CTCGGCGCCG AGCGGCCCTG GGTGTTCGCC CGCAGCGTGG CGGCCCGCGA GGCTCTGGCG
GGTTTCTCCG GCGTACTCGC CGAACTCGGC CGGCGGCCCC TCGGCGAACT GCTGTTCAGC
GACCCAGCCT TCGCCCGCGG CCCGCTGCAG GCCACGCACT ATCCGCCGGA CTGGCTGCCG
GCCGGGATAC GCTGCCCCGG ACTCTGGGGA CGGCGCTCCC GTTTCCACCG GGAAACCCTG
AGCGTGCTGG TGGCGGAAGT CTTCCTGCCG GAGCTCTGGC GCTACCAGGG AATCGACCCG
GACACCCTAT AA
 
Protein sequence
MTAAPAFQWL GADQLHPAPP AVLADWLFDS GSLTRRLTAL SAGRFAVTPL AEGWQVLRDD 
ECTALDVVPG STGWVREVYL LGAERPWVFA RSVAAREALA GFSGVLAELG RRPLGELLFS
DPAFARGPLQ ATHYPPDWLP AGIRCPGLWG RRSRFHRETL SVLVAEVFLP ELWRYQGIDP
DTL