| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_48070 |
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| Symbol | rpoH |
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| ID | 7763669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4871517 |
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| End bp | 4872371 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643807651 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_002801886 |
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| Protein GI | 226946813 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.254094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTT CTCTGCAACC TGTTTCCGCC CTGGTCCCAG GAGCCAACCT GGAGGCCTAC
GTGCATGCGG TCAACAGCAT CCCGCTGCTG ACGGCCGAAC AGGAGCGCGA ACTGGCCGAC
CGTCTCTACT ACCAACAGGA TCTGGACGCT GCACGTCAAA TGGTGCTGGC GCACCTGCGC
TTCGTCGTCC ATATCGCCCG CAGCTATTCC GGTTATGGTC TGGCCCAGTC CGACCTGATC
CAGGAAGGCA ACGTCGGTCT GATGAAGGCC GTCAAGCGTT TCAACCCGGA AATGGGTGTG
CGCCTGGTGT CCTTCGCGGT GCACTGGATC CGCGCCGAGA TCCACGAGTT CATCCTGCGT
AACTGGCGCA TCGTCAAGAT CGCCACCACC AAGGCGCAGC GCAAGCTGTT CTTCAACCTG
CGCAGCCAGA AGAAGCGCCT GGCCTGGCTG AACAACGAGG AAGTCGACGC CGTGGCCGAG
AGCCTGGGCG TCGAGCCGCA TGAAGTGCGC GAGATGGAAA GCCGCCTGAG CGGCCAGGAC
ATGGCCTTCG ACCCGGCCGC CGATGCCGAC GACGACAGCG TCTTCCAGGC GCCGGCCCAT
TACCTGGAAG ACCAGCGCTA CGATCCAGCG CGCCAGTTGG AGGAGGCCGA CTGGAGCGAC
AGCGCCGCAG CCAACCTCCA CGAGGCCCTG GAAGGACTCG ACGAGCGCAG CCGCGACATC
CTCTATCAGC GCTGGCTGGC CGAGGAGAAG GCCACCCTGC ACGACCTGGC GGCCAAGTAC
AAGGTTTCCG CCGAGCGCAT TCGCCAGTTG GAAAAGAGCG CCCTGAACAA GCTCAAGGGC
TCGATCCTGG CATAG
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| Protein sequence | MTTSLQPVSA LVPGANLEAY VHAVNSIPLL TAEQERELAD RLYYQQDLDA ARQMVLAHLR
FVVHIARSYS GYGLAQSDLI QEGNVGLMKA VKRFNPEMGV RLVSFAVHWI RAEIHEFILR
NWRIVKIATT KAQRKLFFNL RSQKKRLAWL NNEEVDAVAE SLGVEPHEVR EMESRLSGQD
MAFDPAADAD DDSVFQAPAH YLEDQRYDPA RQLEEADWSD SAAANLHEAL EGLDERSRDI
LYQRWLAEEK ATLHDLAAKY KVSAERIRQL EKSALNKLKG SILA
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