Gene Avin_47970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47970 
Symbol 
ID7763659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4862735 
End bp4863088 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content70% 
IMG OID643807641 
ProductEndoribonuclease L-PSP family protein 
Protein accessionYP_002801876 
Protein GI226946803 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCC GGCGCCTGCG AACTGAAGCG CGCTACAGTG AAATCGTCGT CCATGGCGGC 
ACCGTCTACC TGGCCGGGCA ACTGGCGGAC GACTACGGCG TCGGCATCGA GGAGCAGACC
CGGCAGACCC TGGCCGGCAT CGACCGGCTG CTCGCCGAGG CCGGCACCGA CAAGTCGCGG
CTGCTCTCGG TGACCATCTA TCTGAAGGAC ATGGTCGCCG ACTACGCCGG CCTCAACGCG
GTATGGGACG CCTGGCTGCC GGCCGGCTGC GCGCCGGCGC GCGCCTGCGT CGAAGCCGGG
CTGTACGACG GCGATGCCCG GGTGGAGATG TCGGTCGTCG CCGCGCTGCC GTAA
 
Protein sequence
MSIRRLRTEA RYSEIVVHGG TVYLAGQLAD DYGVGIEEQT RQTLAGIDRL LAEAGTDKSR 
LLSVTIYLKD MVADYAGLNA VWDAWLPAGC APARACVEAG LYDGDARVEM SVVAALP