Gene Avin_46380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46380 
Symbol 
ID7763502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4712513 
End bp4714069 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content69% 
IMG OID643807483 
Productmajor facilitator superfamily protein 
Protein accessionYP_002801719 
Protein GI226946646 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTC CCGCCGCGGC ACCGAACACG CTGAGCCCGC GCCTGACCAT CGGGCTGGTC 
GGCGTGCTGA TCGCCTCGTT CAGCGCCGGA CTCAACGAGT ACATCACCCA GCACGCCCTG
CTGGACATCA AGGGCGCCCT GGCCATCGGC TACGACGAAG GCACCTGGCT GACCGCCCTG
TATGCCGCCG CCGGGGTCTG CGGCATGGCC TTCGCGCCCT GGTGCTCGTA CACCTTCACG
ATCCGCCGCT TCACCCTGTT CGCCATCGCC GCCTTCGCCT TCCTGGCCTT CCTCGGGCCG
TTCGCGCCCG ATCTGGAAAC CCTCTACCTG CTGCGCATCC TGCAGGGCCT GATGGGCGGC
TGCCTGCCGC CGATGCTGAT GACCGTGGCG CTGCGCTTTC TGCCGCCGGA CGTCAAGCTC
TACGGGCTGG CCGCCTACGC GCTGACCGCC ACCTTCACGC CGAACATCGC CATCCCGCTC
GCCGCGCTCT GGGTCGAGCA CCTGGGCTGG AGCTGGGCCT TCTGGCAGGC CATCCCGCTC
TGCGCGGTCT GCTTCGCCGC GGTCGCCTAC GGCCTGCCGC AGGACCCGAT GCACCTGGAG
CGCTTCCGGC AGTTCGACAC CGTCGGACTG CTGACCGGCA TGCCGGGGCT CTGCGCCCTG
GTCCTCGGCC TGCTGCAAGG CGATCGCCTG GACTGGTTCG AGTCGCCGTT GATCACCACG
CTGCTGGTCG GCGGCGCGGG CCTGTTGCTG GCCTTCTTCG TCAACGAAGC GACTCATCCG
CTGCCGTTCT TCCGGCTGGA CATCCTCAAG CGGCGCAACT TCACCTTCGG GCTGATCGCG
CTGACCTGCA TCCTGATCAT GATCATGATG ACGGTGCTCA TCGGCCTGCC GGGCCGCTAC
CTGGGCGCGC TCCACGAGTA CCGCCCGCTA CAGACGGCGC CGTTGACCCT GCTGGTGGCG
CTGCCGCAAT TGCCGGCGCT GGTGCTGGTC GGCGCGCTGT GCAACATCCC GAGGGTCGAC
TGCCGCTGGG TGATGGCGGC GGGCACGCTG TGCTGCGCGA TTTCCTGCAT CGGCTTCAGC
TTCCTGAGCA GCGACTGGAC GCGGGACAAC TTCTACCCGC TGATGCTGCT GCAGATTGTC
GGCCAGCCGA TGGCGATCAT TCCGATCCTG ATGCTGGCCA CCAGTGCGGT GGTGCCGGCC
GAGGGGGTGT TCGCCTCGTC CTGGTTCAAC ACCACCCGGG CCATCGCCTC GGTGTTCGGC
AGCGCGCTGA CCGGTTACCT GATCACCGCG CGCGGCCATT TCCATTCCGA CGTGCTGGTC
GGCCAGCTCG GCGATTCCGC CCAGGCGACC GAGCTGTACC TGCACGAGTT GCACGAACGC
CTGCCCGAGG TGGCCGCCTC CGAACTGCCC GGCACCCTCG GCCGGCTGGT GCAGGAGCAG
GTGCTGACCC TGACCCTGGC GGACGTCTTC CTCGCCGCCA GCGGCCTGGC GCTGGTGGTG
TTCGCCGCGT TGCTGGTCGT GCCCACGCGC ATCTACCCGC CGCGTTCGCC AGCCTGA
 
Protein sequence
MAAPAAAPNT LSPRLTIGLV GVLIASFSAG LNEYITQHAL LDIKGALAIG YDEGTWLTAL 
YAAAGVCGMA FAPWCSYTFT IRRFTLFAIA AFAFLAFLGP FAPDLETLYL LRILQGLMGG
CLPPMLMTVA LRFLPPDVKL YGLAAYALTA TFTPNIAIPL AALWVEHLGW SWAFWQAIPL
CAVCFAAVAY GLPQDPMHLE RFRQFDTVGL LTGMPGLCAL VLGLLQGDRL DWFESPLITT
LLVGGAGLLL AFFVNEATHP LPFFRLDILK RRNFTFGLIA LTCILIMIMM TVLIGLPGRY
LGALHEYRPL QTAPLTLLVA LPQLPALVLV GALCNIPRVD CRWVMAAGTL CCAISCIGFS
FLSSDWTRDN FYPLMLLQIV GQPMAIIPIL MLATSAVVPA EGVFASSWFN TTRAIASVFG
SALTGYLITA RGHFHSDVLV GQLGDSAQAT ELYLHELHER LPEVAASELP GTLGRLVQEQ
VLTLTLADVF LAASGLALVV FAALLVVPTR IYPPRSPA