| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_46120 |
|---|
| Symbol | trpD |
|---|
| ID | 7763477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4688057 |
|---|
| End bp | 4689103 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643807460 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_002801696 |
|---|
| Protein GI | 226946623 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA AGCAAGCTCT GGCGCGGGTG GCCGAGCGCC TTGACCTGAA CACGGCGGAA
ATGCAGGGCG TGATGCGTCA GATCATGACC GGCCAGTGCA GCGACGCGCA GATCGGCGCC
TTCCTGATGG GAATGCGCAT GAAGAGCGAG AGCATCGATG AGATCGTCGG TGCGGCGCTG
GTCATGCGCG AGCTGGCCGC GCCGGTGACG ATCGGCGTCG AGCGCCTGGT CGATACCTGC
GGCACCGGCG GCGACGGCAT GAACATCTTC AACGTCTCCA CGGCGGCGGC CTTCGTCGTC
GCCGCGGCGG GCGGGCGGGT GGCCAAGCAC GGCAACCGCG CGGTGTCCGG CAAGAGCGGC
AGCGCCGACC TGCTGGAGGC CGCCGGGGTC TACCTGGAGC TGAGCCCCGA GCAGGTGGCG
CGCTGCGTCG AGTCGGTCGG CGTCGGCTTC ATGTTCGCTC CCGCCCATCA CGGCGCGATG
AAGCATGCCA TCGGCCCGCG CCGCGAGCTC GGCCTGCGTA CCCTGTTCAA CATGCTCGGG
CCGATGACCA ACCCGGCCGG GGTGAAGCGT CAGGTGCTCG GCGTGTTCAG CCAGGCGCTG
TGCCGGCCGC TGGCGGAAGT GATGGCGCGC CTGGGCAGCG TGCATGTGCT GGTGGTGCAT
GCCCAGGATG GCCTGGACGA GATCAGCCTG GCCGCGCCGA CCCACATCGC CGAGCTGCGC
AATGGCGAGA TCAGCGAGTA CCTTGTCCAG CCGGAGGATT TCGGCATCAA GAGCCAGAGC
CTGATCGGCC TCGATATAGA GGGGCCGCAG GAGTCGCTGG CGCTGATCCG CGATGCTCTC
GGCCGACGCA AGACCGAGCA TGGGCAGAAG GCCGCCGAGA TGATCGTGCT CAACGCCGGT
GCCGCGCTTT ACGCCGCCGA CCAGGCCGGC AGCCTGAAGG AGGGCGTGGC ACTGGCCCAC
GATGCTCTGC ATACTGGTCT TGCGCGCGAT AAGCTGGAGG AGCTGGCATC CATTACCGCC
GTCTTTCGTC AGGAGAATCA AGCGTGA
|
|---|
| Protein sequence | MDIKQALARV AERLDLNTAE MQGVMRQIMT GQCSDAQIGA FLMGMRMKSE SIDEIVGAAL
VMRELAAPVT IGVERLVDTC GTGGDGMNIF NVSTAAAFVV AAAGGRVAKH GNRAVSGKSG
SADLLEAAGV YLELSPEQVA RCVESVGVGF MFAPAHHGAM KHAIGPRREL GLRTLFNMLG
PMTNPAGVKR QVLGVFSQAL CRPLAEVMAR LGSVHVLVVH AQDGLDEISL AAPTHIAELR
NGEISEYLVQ PEDFGIKSQS LIGLDIEGPQ ESLALIRDAL GRRKTEHGQK AAEMIVLNAG
AALYAADQAG SLKEGVALAH DALHTGLARD KLEELASITA VFRQENQA
|
|---|
| |