| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_46080 |
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| Symbol | speD |
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| ID | 7763473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 4684924 |
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| End bp | 4685718 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643807456 |
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| Product | S-adenosylmethionine decarboxylase |
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| Protein accession | YP_002801692 |
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| Protein GI | 226946619 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAGCA AACTCAAGCT CCACGGGTTC AACAACCTGA CCAAGACCTT GAGCTTCAAC
ATCTACGACA TCTGCTACGC GGAAACGCCG GAAGACCAGC AGGCCTACGT CCGGTACATC
GACGAAGAAT ACGATGCCCA GCGGCTGACG CAGATTCTCA CCGATGTTGT CGATATCATC
GGCGCCAATG TGCTGAATAT CGCCCGCCAG GACTATGATC CGCAGGGTGC CAGCGTGACC
ATCCTGATCT CCGAGCAACC GGTCGAGCCG ACCGAGAGCC AGATCGAGGA GTCGCCCGGG
CCGCTGCCGG AAACCATTCT GGCGCATCTG GACAAGAGCC ACATCACCGT GCATACCTAT
CCGGAAATTC ATCCGGTCGA TGGCCTGGCC ACCTTCCGGG TGGATATCGA TGTGTCCACC
TGCGGGGTGA TCTCGCCGCT GAAGGCGCTC AACTACCTGA TCCATCAGTT CGATTCGGAC
ATCGTCACCG TGGATTACCG GGTACGTGGT TTCACGCGTG ACGTGGAAGG GCGCAAGCAC
TTCATCGATC ATGAGATCAA CTCGATCCAG AAGTATCTCT CCGCGGATAC CCGCGCGGCC
TACCAGATGA CCGACGTGAA CGTATATCAG GAGAACATGT TTCACACCAA GATGCTGCTC
AAGGACTTCG ACCTGGACAA TTACCTGTTC GGCGATGCCA CCCTCAACCT GTCCGTCGAG
CAGCGCAAGC AGGTGGAGAA ACGCCTGCGC CACGAGATGC TGGAGATCTT CTACGCGCGA
AACATGCCGC ATTGA
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| Protein sequence | MKSKLKLHGF NNLTKTLSFN IYDICYAETP EDQQAYVRYI DEEYDAQRLT QILTDVVDII
GANVLNIARQ DYDPQGASVT ILISEQPVEP TESQIEESPG PLPETILAHL DKSHITVHTY
PEIHPVDGLA TFRVDIDVST CGVISPLKAL NYLIHQFDSD IVTVDYRVRG FTRDVEGRKH
FIDHEINSIQ KYLSADTRAA YQMTDVNVYQ ENMFHTKMLL KDFDLDNYLF GDATLNLSVE
QRKQVEKRLR HEMLEIFYAR NMPH
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